Gene VC0395_A0108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0108 
SymbolsspA 
ID5137829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand+ 
Start bp97696 
End bp98331 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content44% 
IMG OID640531568 
Productstringent starvation protein A 
Protein accessionYP_001216073 
Protein GI147675668 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0236194 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGTAG CTGCCAACAA ACGTTCTGTG ATGACTCTAT TTTCAAGTGC ATCTGACATG 
TATAGCCATC AGGTTCGCAT TGTGCTAGCT GAAAAAGGCG TCAGTTTTGA AGTTGAGTTG 
GTTGATGAGA ACAACCTTCC AGCGGAACTG ATTGAGCTAA ATCCTTATAA AACAGTTCCA 
ACACTGGTTG ATCGCGAGCT TGCTCTGTAT GACTCAAAGA TCATCATGGA ATACTTAGAT 
GAGCGTTTCC CTCATCCGCC ACTTATGCCT GTTTACCCAG TTGCACGTGG TAACAGCCGT 
CTGATGATTT ATCGTATCGA AAGAAACTGG TATTCATTGG CAGAAAAAGT AGTGAATGGT 
TCTCCTGAAG TTGCTGAAAA TGCACGTAAT AAGCTACGCA ATGATCTGTT AACTTTAGGG 
CCTGTGTTTG CTGAGTTTGA ATACTTCATG AGTGAAGAGT TCAGTCTGAT CGATTGCTAT 
CTTGCTCCAC TGTTATGGCG TTTGCCTGTG CTGGGCATTG ATTTAATTGG CCCTGGCTCA 
AAAGAGCTGA AAGTGTATAT GAACCGTGTA TTTGAACGTG ATTCATTCTT GGCTTCACTG 
ACTGAAGCTG AACGCGAGAT GCGTCTGGCT CGCTAA
 
Protein sequence
MAVAANKRSV MTLFSSASDM YSHQVRIVLA EKGVSFEVEL VDENNLPAEL IELNPYKTVP 
TLVDRELALY DSKIIMEYLD ERFPHPPLMP VYPVARGNSR LMIYRIERNW YSLAEKVVNG 
SPEVAENARN KLRNDLLTLG PVFAEFEYFM SEEFSLIDCY LAPLLWRLPV LGIDLIGPGS 
KELKVYMNRV FERDSFLASL TEAEREMRLA R