| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0107 |
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| Symbol | petC |
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| ID | 5137417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 96859 |
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| End bp | 97596 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640531567 |
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| Product | ubiquinol--cytochrome c reductase, cytochrome c1 |
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| Protein accession | YP_001216072 |
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| Protein GI | 147673543 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2857] Cytochrome c1 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00110393 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAAT GGATTGTAGT TTTGTTTGCT ATGCTGCCTT CACTGGCGAT GGCGGCTGGA
GCAAATGTGC ATTTAGATAA AGCGAATAAC GATTTGACGG ATCAGGCTTC GCTACAAAAT
GGTGCCAAGC TGTTTATGAA TTACTGCTTT GGTTGCCATT CTACTCAATA TCAACGTTAT
GAACGGGTTG CCAATGATCT TGGCATCCCA GCTGATTTAA TGAAGGAAAA CCTGATTTTT
GATCCTGAGA CCAAAATTGG TCAATTGATG GAAAATGCGA TTCCCGATAA ATCGGCAGCG
AAATGGTTTG GTGCGCCACC ACCAGATTTG ACACTGGTTG CTCGTGTGCG TGGAACCGAT
TGGTTGTATA CCTATTTGCG CTCATTTTAC ACGGATCCTT CACGTCCTTT TGGCGTGAAT
AACATTGTGT TTCCAAGCGT AGGTATGCCC CATGTTCTTG AAGAGCTTCA AGGTACTCCT
GAGCCTATTT TTGAAACCAA AGTCGTCGAT GGCAATGAGG TTCAACATGT GGTTGGCGTG
AAGTCACGTG GAAACGGTGA ATTGAGTGAA GGGGAATATA ACCAAGCAGT ACGTGACTTG
GTGAATTTCT TGGAATATTC CGGTGAGCCG ATGAAGCTTG AGCGCCAAAA CTTAGGCTGG
TGGACAATGG GTTTCTTAGT GATCTTCACC ATTGTCGTTG TCGCACTCAA GAAAGAGTAT
TGGCGTGATG TGCACTAA
|
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| Protein sequence | MKKWIVVLFA MLPSLAMAAG ANVHLDKANN DLTDQASLQN GAKLFMNYCF GCHSTQYQRY
ERVANDLGIP ADLMKENLIF DPETKIGQLM ENAIPDKSAA KWFGAPPPDL TLVARVRGTD
WLYTYLRSFY TDPSRPFGVN NIVFPSVGMP HVLEELQGTP EPIFETKVVD GNEVQHVVGV
KSRGNGELSE GEYNQAVRDL VNFLEYSGEP MKLERQNLGW WTMGFLVIFT IVVVALKKEY
WRDVH
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