Gene VC0395_A0105 details

Gene Information

• Locus tag: VC0395_A0105
• Symbol: petA
• ID: 5135997
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: +
• Start bp: 95004
• End bp: 95597
• Gene Length: 594 bp
• Protein Length: 197 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640531565
• Product: ubiquinol--cytochrome c reductase, iron-sulfur subunit
• Protein accession: YP_001216070
• Protein GI: 147673531
• COG category: [C] Energy production and conversion
• COG ID: [COG0723] Rieske Fe-S protein
• TIGRFAM ID: [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence; [TIGR01416] ubiquinol-cytochrome c reductase, iron-sulfur subunit

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.00000000811722
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTAATG CGCCTCTAAA TCAAGGCCGC AGACGATTTC TGACCGCTAC AACGGCCGTT 
GTGGGTGGTT TAGGAGCCGT TGCGGTTGCC GTACCTTTTA TAAAATCGTG GAACCCGAGC 
GCGAAAGCAA AAGCGGCCGG TGCCCCTGTC GAGGTTGAAA TCAGTAAACT CGAAGAAGGG 
CAGATGGTTC GTGTTGAATG GCGTGGTAAG CCTGTTTGGG TGGTTCGTCG TTCACAAGCT 
GTCGTTGAAG GTTTGAAAAG TCACGAAAAC CAACTTCGTG ATCCGAATTC TGACGAGCTA 
CAACAGCCTA ATTATGCTCA GAATCCTTAT CGTTCGATTA AGCCTGAGTA CTTTATCGCA 
GTCGGTATTT GTACTCATTT GGGTTGCTCA CCAACTTATC TTCCAGATTC TTTTTCTGAG 
CAAGTCCAAG GGGTTAAGTC TGGATTCTTC TGTCCATGTC ATGGTTCAAA ATTTGATATG 
GCAGGGCGAG TATTCCAAGC TGTTCCGGCA CCACTAAATC TTGTTATCCC GCCGCACATG 
TATCTCAGTG ATACGCGGAT CGTGATTGGT CTTGATGAGA CAGGGGAGGC ATAA 

 

Protein sequence

MSNAPLNQGR RRFLTATTAV VGGLGAVAVA VPFIKSWNPS AKAKAAGAPV EVEISKLEEG 
QMVRVEWRGK PVWVVRRSQA VVEGLKSHEN QLRDPNSDEL QQPNYAQNPY RSIKPEYFIA 
VGICTHLGCS PTYLPDSFSE QVQGVKSGFF CPCHGSKFDM AGRVFQAVPA PLNLVIPPHM 
YLSDTRIVIG LDETGEA