| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0086 |
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| Symbol | oadB-1 |
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| ID | 5135594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 75234 |
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| End bp | 76364 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640531546 |
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| Product | oxaloacetate decarboxylase, beta subunit |
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| Protein accession | YP_001216051 |
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| Protein GI | 147675475 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1883] Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit |
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| TIGRFAM ID | [TIGR01109] sodium ion-translocating decarboxylase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.923092 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGACGGAT TAATTACCCT ATGGCAAGAG ACGGGTATTG CCAATTTTGA GCTAGGGCAG
ATCATCATGA TCTTGGTCGG CTGTACGCTA CTGTTTCTGG CCATTCGTAA AGGCTTTGAG
CCGTTATTGC TGCTGCCGAT TGGTTTTGGT GCAGTGTTAG CCAATATTCC TAATGCAGGA
TTTACCGAGC CCGGTGGCTT GCTGTACTAC GTTTACCATA TCGGTATTGA GTCAGGCGTT
TTCCCATTGC TGATCTTTAT GGGCGTGGGA GCGATGACGG ACTTCGGTGC ACTGATTGCC
AACCCGAAAA CCTTGTGGTT AGGCGCTGCG GCTCAGTTAG GCATTTTTGC TACCTTGTTT
GGTGCCATTT TGCTCAACTT TGTACCGGGC ATGGAATTCT CTATGGCTGA TGCCTCGTCG
ATTGCAATCA TTGGTGGAGC GGATGGTCCA ACGGCCATTT TCCTTGCCAG CCAGTTATCG
CCGGATTTGC TCGGGGCAAT TGCGGTCGCT GCGTATAGCT ATATGGCGCT GGTTCCGATT
ATTCAACCAC CGATCATGAA GGCCTTGACG ACGCCGGAAG AGCGTAAAAT CAAGATGGCT
CAGCTACGCC ACGTGGGTAA AACCGAGAAA ATCGTGTTTC CACTCGTGGT GCTGCTAATG
ACCATTCTGT TTTTGCCTGC GGCAACACCC TTGGTCGGCA TGTTCTGCTT GGGGAATCTG
ATGCGTGAAG CGGGTGTGGT GGATCGTTTG TCCAAAACCG CGCAAAACGA GCTGATCAAT
ATCGTCACCA TTTTCTTAGG CTTGGGGGTC GGCTCTAAAT TGCAAGCCGA GACTTTCCTC
AATTTGGAAA CCTTAGGTAT TTTGGCACTC GGCGCGGCTG CTTTCAGTAT TGGCACGGCG
GGTGGGGTGA TTATGGCGAA GATCCTCAAT AAATTTTCCA AAGAGGATAT CAACCCACTG
ATCGGTGCTG CGGGTGTTTC TGCGGTACCT ATGGCCGCTC GAGTCGTCAA TAAAGTGGGC
CTAGAGGCCA ACCCGCAAAA CTTCTTATTG ATGCATGCCA TGGGGCCAAA TGTGGCTGGT
GTTTTGGGCT CAGCGGTAGC GGCAGGTGTG TTGCTGGCTC TAGTGGGTTA A
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| Protein sequence | MDGLITLWQE TGIANFELGQ IIMILVGCTL LFLAIRKGFE PLLLLPIGFG AVLANIPNAG
FTEPGGLLYY VYHIGIESGV FPLLIFMGVG AMTDFGALIA NPKTLWLGAA AQLGIFATLF
GAILLNFVPG MEFSMADASS IAIIGGADGP TAIFLASQLS PDLLGAIAVA AYSYMALVPI
IQPPIMKALT TPEERKIKMA QLRHVGKTEK IVFPLVVLLM TILFLPAATP LVGMFCLGNL
MREAGVVDRL SKTAQNELIN IVTIFLGLGV GSKLQAETFL NLETLGILAL GAAAFSIGTA
GGVIMAKILN KFSKEDINPL IGAAGVSAVP MAARVVNKVG LEANPQNFLL MHAMGPNVAG
VLGSAVAAGV LLALVG
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