Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0045 |
Symbol | dnaG |
ID | 5136249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 43166 |
End bp | 44995 |
Gene Length | 1830 bp |
Protein Length | 609 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640531505 |
Product | DNA primase |
Protein accession | YP_001216018 |
Protein GI | 147674914 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0358] DNA primase (bacterial type) |
TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00000233993 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAATCCT TTGGAAAGCA CGGCTTGTTT GTATTTGACC CTATCTTTCG GTGCATGCAA AGATTTATGG CAGGACACAT CCCCCGCAGT TTTATTGATG ACCTCCTTGC TCGACTCGAT ATTGTCGACG TTATTGACGC ACGCGTAAAA CTGAAGAAGA AAGGCAAAAA CTACAGCGCC TGCTGCCCTT TCCATAACGA AAAAACCCCT TCATTCAGTG TCAGTCAGGA AAAACAGTTC TATCACTGCT TCGGCTGTGG TGCTCATGGC AATGCCATCG ATTTTGTCAT GGAATATGAA CGCATGGAGT TTCCTGAGGC CATTGAAGAG CTGGCGTCGA CCATAGGTCT TGAAGTTCAG CGTGAAGAAA GAACGCCTTC CAGCCCCTTT GCGAAAAATA CGCCAGCCGT CAAAAGTGAA GATAAGCGCA GCCTGTATGA CTTGATGGGC AGCATCGCCC AGTTTTATCG TCAGCAGCTT AAAGTTCCTG CCAACAAGCA TGCGATTGAA TACTTAAAAA ATCGTGGTTT ATCTGGAGAA ATCGTCCAGA AATTTGGCAT TGGATACATA GCGGATGAAT GGGATCTTGT ACGGCGCAAT TTTGGTCAGC AGCGCAGCAG TGAAGATATG CTTGTCACCG CAGGTATGCT GATTGAAAAC GATAACGGCC GCCGTTATGA CCGCTTTCGC GGACGAGTCA TGTTCCCAAT TCGCGATCGT CGAGGTCGAG TCATTGGTTT TGGTGGCCGT ATTACAGAGC AAGGTACACC GAAATACCTG AACTCGCCTG AAACCCCGAT TTTCCATAAA GGCAAAGAGC TGTATGGCCT TTATGAAGTC CTGCAGGCAT ACCGTGAACC ACCACAAATC CTAGTGGTGG AAGGCTATAT GGATGTCGTG GCACTCGCTC AATATGGTGT CGATTACTCT GTAGCCTCTC TGGGCACCTC AACCACAGGC GATCACTTAC AACTGTTGTT TCGCCAAACT AACCATGTCA TCTGTTGTTA TGATGGTGAC CGAGCTGGAC GTGATGCCGC ATGGCGCGCA TTAGAAAATG CACTCAGCTA CCTCAAAAGC GGCAATATCT TAAAGTTTCT GTTTCTGCCG GACGGTGAAG ATCCCGATAG CTACGTGCGT AAATACGGCA AAGCCGATTT TGAACAACAG GTTGCCAATG CTACACCACT GTCGCAGTAC TTATTTGAGA ACTTGATTGA ACTGCACCAA ATTAACTTGG GTAGCCATGA AGGTAAATCG GCACTGCGCG CCGTTGCAAC ACCACTTATC GACAAAATTC CGGATCCTTT TTTACAAGAG ATCCTAGAGA AATTACTCGA TGAACGGACA GGCTTTGATC ACCAACTGCG CCGTAAAAAA GCACGTAAGA CAGAAAATCG ACCCGCACCA CATAAAGCAA TAAAACGGAC CCCAATGCGT GATGTTATCG CGCTCTTGAT ACAAAATCCG AGCTATGCTG AATTGGTACC AGACCTAGCG AGCGTGCGTC ATTTGATGAT CCCTGGTCTC GATACCTTCA GTGAAGTACT TGAGAAATGT CGTCAATATC CCCATATCAC TACGGGTCAA TTACTCGAAC ATTGGCGAGA CTCAAAAAAT GAGACACTTC TGTCTCGTCT GGCAAGTTGG GAAATTCCCC TTGTCGAAGA CAATCAAGAA GAACTATTTT TAGACTCATT GGACAAAATT CTTGCCCAGT GCGTAGAAAA ACAAATTGAA AATTTGCAGG CCAAAGAGCG AAGTGTCGGT TTATCAACCG AAGAGAAAAG AGAGCTACAA GACTTGATCT TAAAAGGCTT GAAAGCGTAA
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Protein sequence | MQSFGKHGLF VFDPIFRCMQ RFMAGHIPRS FIDDLLARLD IVDVIDARVK LKKKGKNYSA CCPFHNEKTP SFSVSQEKQF YHCFGCGAHG NAIDFVMEYE RMEFPEAIEE LASTIGLEVQ REERTPSSPF AKNTPAVKSE DKRSLYDLMG SIAQFYRQQL KVPANKHAIE YLKNRGLSGE IVQKFGIGYI ADEWDLVRRN FGQQRSSEDM LVTAGMLIEN DNGRRYDRFR GRVMFPIRDR RGRVIGFGGR ITEQGTPKYL NSPETPIFHK GKELYGLYEV LQAYREPPQI LVVEGYMDVV ALAQYGVDYS VASLGTSTTG DHLQLLFRQT NHVICCYDGD RAGRDAAWRA LENALSYLKS GNILKFLFLP DGEDPDSYVR KYGKADFEQQ VANATPLSQY LFENLIELHQ INLGSHEGKS ALRAVATPLI DKIPDPFLQE ILEKLLDERT GFDHQLRRKK ARKTENRPAP HKAIKRTPMR DVIALLIQNP SYAELVPDLA SVRHLMIPGL DTFSEVLEKC RQYPHITTGQ LLEHWRDSKN ETLLSRLASW EIPLVEDNQE ELFLDSLDKI LAQCVEKQIE NLQAKERSVG LSTEEKRELQ DLILKGLKA
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