| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0038 |
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| Symbol | |
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| ID | 5136069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 34679 |
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| End bp | 35461 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640531498 |
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| Product | DeoR family transcriptional regulator |
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| Protein accession | YP_001216012 |
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| Protein GI | 147674087 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTGTTTTA TAATGTCGAA ACGAAATACA CAACTGAGAA GGCACACAAT AGTTAAGCTG
GTTAATGAAC AAGGTGAGGT GAGTGTTGAG GCTCTCTCTT CTCAGTTTGA AACATCAGAA
GTGACTATTC GCAAAGACTT AGCTTCTCTT GAAAAAAATG GCCAATTGCT GCGTCGCTAT
GGTGGTGCTA TCGCATTACC GAAAGAAGTG ATGCACGATG AATTGAATGA AAAAGTTTCA
GTTCGAAAGA TTTCTCTGGC TAAAGCTGCA GCGAAACTAA TCCGTGATCA TAATCGGATT
GTGATTGATA GTGGCAGCAC CACGGCGGCG TTAATTCAGC AACTGAATGA CAAGCGAGGG
CTGGTCGTGA TGACCAACTC ATTGCATGTC GCGAATGCAC TCAATGAATT AGAAAATGAA
CCCACACTGC TGATGACTGG CGGTACTTGG GATACCCATT CTGAATCCTT CCAAGGCAAA
GTCGCAGAAT CGGTACTGCG CTCTTACGAT TTTGACCAGC TGTTTATCGG TGCTGATGGC
ATCGATCTTG ACCGGGGGAC GACCACGTTC AATGAGCTGG TTGGGCTTAG CAAAGTGATG
GCTGAAGTCT CGCGTGAAGT GATCGTGATG ATTGAGTCAG ACAAAGTGGG CCGCAAAATT
CCGAACTTAG AGCTGAGCTG GGACAACATT GATGTCTTAG TCACAGATCA TGAATTGAGT
GACGAATTTG CCAAACAAAT TGAATCTCAC CAAGTGCGCG TGATCCGTGC AACCGTGAAA
TAA
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| Protein sequence | MCFIMSKRNT QLRRHTIVKL VNEQGEVSVE ALSSQFETSE VTIRKDLASL EKNGQLLRRY
GGAIALPKEV MHDELNEKVS VRKISLAKAA AKLIRDHNRI VIDSGSTTAA LIQQLNDKRG
LVVMTNSLHV ANALNELENE PTLLMTGGTW DTHSESFQGK VAESVLRSYD FDQLFIGADG
IDLDRGTTTF NELVGLSKVM AEVSREVIVM IESDKVGRKI PNLELSWDNI DVLVTDHELS
DEFAKQIESH QVRVIRATVK
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