| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0028 |
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| Symbol | irgA |
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| ID | 5137888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 22921 |
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| End bp | 24879 |
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| Gene Length | 1959 bp |
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| Protein Length | 652 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640531488 |
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| Product | enterobactin receptor protein |
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| Protein accession | YP_001216002 |
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| Protein GI | 147674899 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0000507235 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCAGAT TCAATCCATC CCCCGTCAGT TTATCTGTGA CACTAGGCTT AATGTTTTCG
GCTAGCGCTT TTGCTCAAGA CGCGACGAAA ACGGATGAAA CCATGGTGGT CACTGCGGCG
GGATACGCGC AAGTGATTCA AAATGCACCA GCCAGTATCA GTGTGATTTC AAGAGAAGAT
CTGGAATCTC GCTATTACCG TGATGTGACC GATGCGCTAA AAAGCGTACC GGGTGTGACA
GTCACCGGAG GGGGCGATAC TACCGATATC AGCATTCGTG GTATGGGATC AAACTATACT
CTTATCTTGG TGGATGGTAA GCGCCAAACC TCACGCCAGA CCCGTCCAAA CAGCGATGGC
CCGGGCATTG AGCAAGGTTG GTTACCGCCA CTGCAAGCGA TTGAACGTAT CGAGGTGATC
CGTGGCCCGA TGTCTACGCT GTACGGCTCG GATGCGATTG GCGGCGTGAT CAACATCATC
ACTCGTAAAG ATCAGCAGCA GTGGTCAGGC AATGTGCAGC TATCGACCGT GGTACAAGAA
AATCGCGCCT CAGGCGATGA ACAAAGCGCT AATTTCTTCG TAACAGGACC TTTAAGTGAT
GCTCTATCGC TGCAAGTCTA CGGACAAACC ACGCAACGCG ATGAAGACGA AATTGAGCAT
GGTTACGGCG ATAAATCACT GCGCAGCTTA ACCTCAAAGC TCAACTACCA GCTTAATCCA
GATCATCAAC TGCAACTGGA AGCCGGTGTA TCAGCCCAAG ATCGCGAAAA TAACGTGGGC
AAGTCGGCGC AATCCAGCGG ATGTCGCGGT ACATGCAGCA ATACCGATAA CCAGTACCGT
CGCAACCATG TTGCCGTCTC TCACCAAGGG GATTGGCAGG GTGTTGGGCA GTCTGATACT
TATCTGCAAT ATGAAGAGAA CACCAATAAA TCTCGTGAGA TGAGCATTGA TAATACGGTG
TTCAAATCCA CGTTAGTGGC TCCTATTGGT GAGCATATGT TGAGCTTTGG TGTGGAAGGT
AAACACGAAA GTTTAGAGGA TAAAACCTCC AACAAAATTT CGTCTCGCAC GCATATCTCG
AACACTCAAT GGGCGGGATT CATTGAAGAT GAATGGGCGC TCGCAGAGCA ATTCCGCCTG
ACCTTTGGTG GCCGTCTGGA TCATGATAAA AACTACGGCA GCCACTTCAG CCCACGTGTG
TATGGCGTAT GGAATCTCGA TCCTCTATGG ACAGTAAAAG GTGGTGTTTC TACTGGCTTC
CGTGCACCGC AATTACGTGA AGTGACGCCG GATTGGGGGC AAGTTAGTGG CGGCGGTAAT
ATTTACGGCA ACCCGGATTT ACAGCCTGAA ACTTCGATTA ACAAAGAACT GAGTTTGATG
TACAGCACTG GCTCAGGTCT GGCGGCATCG TTAACCGCTT TCCATAATGA TTTTAAAGAT
AAAATCACCC GCGTCGCTTG CCCTGCAAAT ATTTGTACTG CCGGCCCCAA CCAATGGGGT
GCAACTCCTA CTTATCGTGT GAATATTGAT GAAGCGGAAA CCTATGGTGC AGAAGCTACG
TTAAGTCTGC CGATTACCGA AAGCGTTGAG TTATCGTCTA GCTACACGTA CACCCATTCG
GAGCAAAAAT CAGGGAATTT TGCTGGCCGT CCGCTACTGC AGTTACCTAA ACATCTGTTC
AATGCCAACT TGAGCTGGCA AACCACAGAT CGCCTCAATA GCTGGGCTAA CCTCAACTAT
CGTGGTAAGG AGATGCAGCC GGAGGGTGGG GCATCGAACG ATGATTTCAT CGCGCCAAGC
TACACCTTTA TCGATACTGG CGTGACTTAC GCACTCACCG ATACCGCAAC GATTAAAGCT
GCGGTGTACA ACCTGTTTGA TCAAGAGGTG AATTACGCGG AGTATGGCTA TGTAGAAGAT
GGCCGCCGCT ACTGGTTGGG TTTAGACATC GCCTTCTAA
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| Protein sequence | MSRFNPSPVS LSVTLGLMFS ASAFAQDATK TDETMVVTAA GYAQVIQNAP ASISVISRED
LESRYYRDVT DALKSVPGVT VTGGGDTTDI SIRGMGSNYT LILVDGKRQT SRQTRPNSDG
PGIEQGWLPP LQAIERIEVI RGPMSTLYGS DAIGGVINII TRKDQQQWSG NVQLSTVVQE
NRASGDEQSA NFFVTGPLSD ALSLQVYGQT TQRDEDEIEH GYGDKSLRSL TSKLNYQLNP
DHQLQLEAGV SAQDRENNVG KSAQSSGCRG TCSNTDNQYR RNHVAVSHQG DWQGVGQSDT
YLQYEENTNK SREMSIDNTV FKSTLVAPIG EHMLSFGVEG KHESLEDKTS NKISSRTHIS
NTQWAGFIED EWALAEQFRL TFGGRLDHDK NYGSHFSPRV YGVWNLDPLW TVKGGVSTGF
RAPQLREVTP DWGQVSGGGN IYGNPDLQPE TSINKELSLM YSTGSGLAAS LTAFHNDFKD
KITRVACPAN ICTAGPNQWG ATPTYRVNID EAETYGAEAT LSLPITESVE LSSSYTYTHS
EQKSGNFAGR PLLQLPKHLF NANLSWQTTD RLNSWANLNY RGKEMQPEGG ASNDDFIAPS
YTFIDTGVTY ALTDTATIKA AVYNLFDQEV NYAEYGYVED GRRYWLGLDI AF
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