| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_1108 |
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| Symbol | |
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| ID | 5134418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 1073668 |
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| End bp | 1075320 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640531430 |
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| Product | hypothetical protein |
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| Protein accession | YP_001215944 |
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| Protein GI | 147671928 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAAAGA TACACGCACC GTTTCAATCC GTACTTTTTT GGCTAACGCT GCTGGTAAGT
TTGCTGGCAC TTCCCGCGCA TTCCGCTGAT TTAGTGGCCA GTGTCAGCAA AAATAAAGTG
GTCAAAAATC AAGTGTTTCA GCTGCGAATT GTCAGTCATG ACAAAGTCTC TGCTGATGCC
CTCGATTTTT CCCAACTGGA GCCTGACTTT TTTGTTGGCC AGCCGAGTTT TGCCTCCTCG
ACCAATATCA TCAATGGCAA CTACTCACAA CGCAGTGAAT GGACCGTTGC GCTTGCGGCG
CAAAAAGTAG GCATAGTGAC TATCCCAAGT TTCCAGTTAG GGAGTCACCA AACCTCCCCT
ATCGCGATCC AAGTGACTGA AGATCAAGAC CAACCTGCCC AGGAAGAGTT GGCGGAGGTA
CGCAGCCGTT TAGAACGAAC AGAGCTTTAT CCTGGTGAAA GCACACTATT CCACGCGCAG
TTGATCATTA AGGAAGACAT TCGTCGCCTG CGCGACCCCA AGATTACCCC ACCGAAAGTC
GAGGGCATGC GTTTAGAATC GGCGAGCGAG CCGAAACAGT ATCCGAGTGT GCTCAATGGG
GTAGAAGTGA CGATTGTCGA ACAATCCTTT CGCATCACCG CTGAGCAGGC AGGCCAGTTT
ACCTTAAGTG AGCCTGTGCT TAAGGCCGGC TTATTGTATG GTAACCAATA CAGTGGCAAT
ACTCGCTTAA TCCCAATACT GACTAAGGCC AAAAACTACT CAATCCAAGT ATTAGAAAAA
CCCAAACACT ATCAGGGCAC TTGGCTGCCC ACCGCCAAGC TGAGCCTGAC TCAAGAGTGG
CAAGATGGGC AACAAAAGCT CGACTCAACC ACTGCCTACT CGACTCAAGT TGGCCATGCC
ATTACTCGCG AGATTCGTCT GCAAGTCAGT GGGTTGACTC AACAACAATT GCCAAACATC
CACATCCCAT ACCCAGAGAG CATCAGCGTC TATGCTGAGA AGCCGCAATT TAGTACGCTG
GATAATGGCG ATACCGTAAT GACCTTCAAG CAAGTGCTGA TCCCTCGTCA GGCAGGAGAT
ATTCACTTAC CCGAGTTCAA CCTCAACTGG TGGAACACCC AGACACAAGC GGAGCAGACC
AGCCAAGTGG CAGGCATGAC TTTGCAAGTC AAACCCAGCG AAGAAACGCC TGTATTACCC
ACGCCGAGCC AGCCGAGTAC TCCTGAGATC CAGCAGGTCG TCGACGCTGG CTATTGGCCA
TATATCACTC TGCTGTTTGC GCTGCTGTGG CTCAGTACGG CCCTCTTGGC TTGGATGTTG
TGGCGTCACA AGCACACCGA CCCTCAGGCG AACCATAAAA CGAAAGCGGC CTCTAACGCA
CCGTCTTGCG CCTATCAAGC CGTGCTACAA GCTATCGAGC AACAAGACTT ACTGGCTCTG
AGCCCAGCGT TACGTACTTG GCAAAAGGAA GTGATGCTGA ATCAAGAAGA GGAGCAAACC
CTGACGGCTC TTGTCCATAC ATTACAGCAA GCTTGTTTCT CGGAGCGGAC GGAGCAACCG
GATTTCAATC CCTTGAAAAA TTGGCTTGTG GCTAAACAGA AACAGCAGGG GAAAATGCAG
CGCAGCCGTT CATCCACTTT ACCACCGTTA TAA
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| Protein sequence | MVKIHAPFQS VLFWLTLLVS LLALPAHSAD LVASVSKNKV VKNQVFQLRI VSHDKVSADA
LDFSQLEPDF FVGQPSFASS TNIINGNYSQ RSEWTVALAA QKVGIVTIPS FQLGSHQTSP
IAIQVTEDQD QPAQEELAEV RSRLERTELY PGESTLFHAQ LIIKEDIRRL RDPKITPPKV
EGMRLESASE PKQYPSVLNG VEVTIVEQSF RITAEQAGQF TLSEPVLKAG LLYGNQYSGN
TRLIPILTKA KNYSIQVLEK PKHYQGTWLP TAKLSLTQEW QDGQQKLDST TAYSTQVGHA
ITREIRLQVS GLTQQQLPNI HIPYPESISV YAEKPQFSTL DNGDTVMTFK QVLIPRQAGD
IHLPEFNLNW WNTQTQAEQT SQVAGMTLQV KPSEETPVLP TPSQPSTPEI QQVVDAGYWP
YITLLFALLW LSTALLAWML WRHKHTDPQA NHKTKAASNA PSCAYQAVLQ AIEQQDLLAL
SPALRTWQKE VMLNQEEEQT LTALVHTLQQ ACFSERTEQP DFNPLKNWLV AKQKQQGKMQ
RSRSSTLPPL
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