| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_1098 |
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| Symbol | |
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| ID | 5135032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 1063150 |
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| End bp | 1064358 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640531420 |
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| Product | NupC family protein |
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| Protein accession | YP_001215934 |
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| Protein GI | 147672143 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1972] Nucleoside permease |
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| TIGRFAM ID | [TIGR00804] nucleoside transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGATTT TGTTTGGAAT CATCGGTGTT ACGGTACTGA TCTTATGCGC GTATCTGCTC
TCTGAAAGCC GCAGTGCGAT TAATTGGAAA ACCATTTCCC GAGCCTTGTT GTTGCAAATT
GGTTTTGCGG CTCTTGTGCT TTATTTCCCA TTGGGGCAAA CCGCGCTAAG CAGCTTGAGT
AATGGGGTTT CTGGTTTGCT CGGTTTTGCC GATGTCGGCA TTCGCTTTCT GTTTGGTGAT
CTTGCCGATA CGGGCTTTAT TTTTGCTGTT CGTGTATTAC CTATCATCAT CTTCTTCAGT
GCGCTGATTT CTGCCCTTTA TTACCTCGGT GTGATGCAAA AAGTGATCGC CCTGATCGGC
GGTGGCATTC AACGCTTCTT AGGCACCAGT AAGGCGGAAT CACTGGTCGC GACAGGCAAT
ATTTTCCTAT CACAAGGCGA ATCGCCACTT TTGGTGCGCC CCTTCCTTGC CAATATGACA
CGCTCCGAAC TGTTTGCGGT CATGGCGGGC GGTATGGCAT CGATAGCAGG CTCAGTGCTG
GGGGGTTACG CAGGTTTAGG GGTTGAGCTG AAATACTTGA TTGCAGCGAG TTTCATGGCG
GCGCCGGGCA GTTTAATGAT GGCGAAAATC ATTGTTCCTG AGCGTGGTGT GCCAATCGAT
CAAAGCCAAG TCGAGTTGGA TAAAGCGCAA GACAGCAACT TGATTGATGC TCTCGCTAGC
GGTGCAATGA ATGGTATGAA AGTCGCCGTT GCAGTGGGCA CTATGTTGAT TGCGTTCGTC
AGCGTGATCG CTATGGTCAA CACTGGCCTT GAAAATCTGG GCGATCTGGT TGGGTTTAGC
GGCATTACCT TACAAGCCAT GTTCGGTTAT CTGTTTGCTC CACTGGCATG GGTGATTGGC
ATTCCAAGTC ACGAAGTGCT GGCGGCAGGT TCCTACATCG GTCAGAAAGT GGTGATGAAC
GAATTTGTCG CTTTCATTGA CTTTGTTGAG CATAAAGCGC TGCTTTCTGA GCATAGCCAA
GTCATCATCA CGTTTGCATT GTGTGGCTTT GCCAACATTG GCTCTATCGC GATCCAATTG
GGCTCCATTG GCGTGATAGC CCCTGAGCGC CGCTCGGAAG TGGCGAACCT AGGCATTAAA
GCGGTCATTG CTGGCACTTT AGCCAACCTA ATGAGCGCTT GCTTAGCGGG GATTTTCATC
TCGCTATAA
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| Protein sequence | MAILFGIIGV TVLILCAYLL SESRSAINWK TISRALLLQI GFAALVLYFP LGQTALSSLS
NGVSGLLGFA DVGIRFLFGD LADTGFIFAV RVLPIIIFFS ALISALYYLG VMQKVIALIG
GGIQRFLGTS KAESLVATGN IFLSQGESPL LVRPFLANMT RSELFAVMAG GMASIAGSVL
GGYAGLGVEL KYLIAASFMA APGSLMMAKI IVPERGVPID QSQVELDKAQ DSNLIDALAS
GAMNGMKVAV AVGTMLIAFV SVIAMVNTGL ENLGDLVGFS GITLQAMFGY LFAPLAWVIG
IPSHEVLAAG SYIGQKVVMN EFVAFIDFVE HKALLSEHSQ VIITFALCGF ANIGSIAIQL
GSIGVIAPER RSEVANLGIK AVIAGTLANL MSACLAGIFI SL
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