Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_1058 |
Symbol | |
ID | 5134937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | - |
Start bp | 1033175 |
End bp | 1033852 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640531381 |
Product | BRO domain-containing protein |
Protein accession | YP_001215895 |
Protein GI | 147672232 |
COG category | [K] Transcription |
COG ID | [COG3617] Prophage antirepressor |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTTCAG TACTGACTTT TCAGGACACC CATTTTGATG TAGTTGAACG TAACAATCAG TTGTATCTCG ATGCGTACCA AATTGGTACG GCACTAGGTT ATAGCGATCC AAGAACTGCT GTACGTAAAA TTTTTAATCG TAACAAAGAT GAGTTTTCCA GTGGAATGTC TGAGGTCATC AATTTGATGA CCTCAGGAAA CTACCAAAAA TCCGTACGTA TTTTCTCACT GCGCGGCGCT CACCTCATCG CCATGTTCGC CAGAACGGCC ATCGCAAAAC AGTTCAGAAA GTGGGTGCTC GATATCCTCG ATCAAGAAAC CAAAACCCAA ACCATCATCC CCATTACCAC CCCAACGCAA ATTCCCAAAG CCAACTGGCC GATCACCTAC CAAACCGATT GGAAACCCGC CACCATCACG TTGTTTGGTA AAACCGCCCA CTATGTGCGT TTCGAGCTAA GACCCAAACC ATTCAGTTGC GAGTTCAGTG CAAAACACAC TCCGCAGGTT TATCAGGCGG TATTCCATTT CGCTGACCAA TACAAAAGAC CAAGTATCAG GAATGAAGCC CCAATGATTG GGGATATTGG CTATTTTGAA TCAACAAGGC TTGATGACTT ATGGGTACAA GTTATTAACT TTGCGGCAAG GTGCAATAGC CAATGTGCCT TGCTTTAA
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Protein sequence | MTSVLTFQDT HFDVVERNNQ LYLDAYQIGT ALGYSDPRTA VRKIFNRNKD EFSSGMSEVI NLMTSGNYQK SVRIFSLRGA HLIAMFARTA IAKQFRKWVL DILDQETKTQ TIIPITTPTQ IPKANWPITY QTDWKPATIT LFGKTAHYVR FELRPKPFSC EFSAKHTPQV YQAVFHFADQ YKRPSIRNEA PMIGDIGYFE STRLDDLWVQ VINFAARCNS QCALL
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