Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_1024 |
Symbol | rhlE-2 |
ID | 5133937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | + |
Start bp | 1003972 |
End bp | 1005327 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640531346 |
Product | ATP-dependent RNA helicase RhlE |
Protein accession | YP_001215860 |
Protein GI | 147672261 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTTTTA CCTCGCTCGG TCTGTCTGCG CCAATCCTTA AAGCTATTGA AGAGAAAGGA TACAACACGC CTTCACCGAT TCAGTTACAG GCTATTCCTG CGGTTTTAGC AGGCAAAGAC GTGATGGCCG CAGCTCAAAC TGGCACAGGA AAAACGGCTG GCTTTACGCT ACCTATTTTA GAATTGCTGG CAAAAGGGCC AAAAGTTCGC GCCAATCAAG TTCGTGCTTT AATCCTTACC CCAACGCGTG AACTGGCCGC ACAAATCCAA GACAATGTCA TGCTCTATGG CCGCCATCTA CCGCTCAAGA GCGCGGTTGT GTTTGGTGGT GTGAAAATTA ACCCACAAAT GCAGCGAATG TGTAAAGGTG CGGATATCTT AGTGGCAACC CCAGGCCGCT TAATGGATCT GTATAACCAA AATGCGGTCA AATTTGATCA GTTGGAAATT TTGGTACTTG ACGAAGCAGA TCGCATGCTC GACATGGGCT TTATTCGTGA CATTCATAAG ATACTGAAAT TATTGCCTGA AAAGCGCCAA AACCTACTGT TTTCAGCTAC CTTCTCGACC GAAATCCGTG AGCTTGCCAA AGGCTTGGTG AATAACCCCG TCGAAATTTC AGTCAGCCCA GCCAACTCAA CGGCAAGAAC CGTTGAGCAG TGCATTTATC CTGCTGATGT GAAAAAGAAA CCGGACATGC TGGTGAAATT GGTCAAAGAG GGGAATTGGC AACAAGTGCT GGTATTTATG CGTACCAAGC ATGGTGCCAA CCGCTTAGCG ACCTATCTCA ACGAGCAAGG TTTAACCGCG GCCGCGATTC ACGGCAATAA GAGCCAAGGC GCACGCACCC GAGCACTGGC GGATTTTAAA GCGGGAGAGG TGCGTATTCT GGTCGCAACA GATATTGCGG CGCGTGGCAT TGATATCCCG CAACTGCCTC AAGTGGTGAA TTTTGAATTG CCGAAAATTG CTGAAGATTA CGTGCACCGA ATTGGCCGAA CAGGCCGAGC AGGTGAAGTC GGTAAAGCGA TTTCTTTGGT GAGTGCCATT GAAGCACCGG AATTATTTGC GATTGAGCGT TTAACGCAAG CCTTACTGCC CCGTGTAAAT TTAGCGGGAT TTGAGCCGAC CAACCAACTC CCTGAGTCAA AATTAGACAC TCGACCTTTG AAGCCGAAAA AGCCCAAAAA GCCTAAAAAG GTAGAGGGAG CTGGAGAAAA CAAAGGCAGC GTAGCTGAAA ACAAACCTAA AGCTGGCCAC CGAGGCCAGC CTACAGGACA AGCTCGCACA GCGAAAAAAG GCGGCACTCA TTCGGAGCCG AAAAAACCGA CAAAGCGCCC TGTTAGAAAT GGGTAA
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Protein sequence | MGFTSLGLSA PILKAIEEKG YNTPSPIQLQ AIPAVLAGKD VMAAAQTGTG KTAGFTLPIL ELLAKGPKVR ANQVRALILT PTRELAAQIQ DNVMLYGRHL PLKSAVVFGG VKINPQMQRM CKGADILVAT PGRLMDLYNQ NAVKFDQLEI LVLDEADRML DMGFIRDIHK ILKLLPEKRQ NLLFSATFST EIRELAKGLV NNPVEISVSP ANSTARTVEQ CIYPADVKKK PDMLVKLVKE GNWQQVLVFM RTKHGANRLA TYLNEQGLTA AAIHGNKSQG ARTRALADFK AGEVRILVAT DIAARGIDIP QLPQVVNFEL PKIAEDYVHR IGRTGRAGEV GKAISLVSAI EAPELFAIER LTQALLPRVN LAGFEPTNQL PESKLDTRPL KPKKPKKPKK VEGAGENKGS VAENKPKAGH RGQPTGQART AKKGGTHSEP KKPTKRPVRN G
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