| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0860 |
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| Symbol | |
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| ID | 5134283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 873168 |
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| End bp | 873707 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640531182 |
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| Product | isochorismatase family protein |
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| Protein accession | YP_001215696 |
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| Protein GI | 147672445 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1335] Amidases related to nicotinamidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 0.9493 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGACA AGGAAAATAC TGGTCTGATT ATCGTTGATA TCCAAGGCAA GTTGGCTCGA
TTGGTTTCTG ACAGTAATGA GCTTGTTTCA AATTGCATAA AACTAATTAA AGGAGCTCAA
TTGCTAGGAT TGCCAATAGT TTGGCTTGAG CAAAATCCAG ATAAATTAGG CCAAACCATC
GAAGAGCTCA CTGTGTTACT GAGTAATCAA CAACCGATTA GCAAGTTCAG TTTTGGTGCC
TGTGGTGAGC CTCGTTTCAT CGAAACTATC CAAAAATCGA ATAAAACGTC TTGGTTAATA
TGTGGTATCG AAGCTCACAT ATGTGTTTAT CAAACGGCTA TTCATCTCAA AAATCTAGGT
TACGACATAC ATTTAGTGAG TGATTGCGTG TCTTCACGTG ATGCATCAAA CAAGGAGCTA
GCAATTACAA AGCTAGCAGG AGCTGGTGTT GAAATAACAG GTTTAGAAAT GAGTCTTTAT
GAACTGGTTA AAGATTGTCG AGCGCCAGAG TTTAAAGGAA TACTCAATCT AATTAAGTAG
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| Protein sequence | MLDKENTGLI IVDIQGKLAR LVSDSNELVS NCIKLIKGAQ LLGLPIVWLE QNPDKLGQTI
EELTVLLSNQ QPISKFSFGA CGEPRFIETI QKSNKTSWLI CGIEAHICVY QTAIHLKNLG
YDIHLVSDCV SSRDASNKEL AITKLAGAGV EITGLEMSLY ELVKDCRAPE FKGILNLIK
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