| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0810 |
|---|
| Symbol | |
|---|
| ID | 5134676 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009456 |
|---|
| Strand | - |
|---|
| Start bp | 843259 |
|---|
| End bp | 844116 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640531132 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001215646 |
|---|
| Protein GI | 147671821 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 0.866367 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGATG GTAATTCTGT TATTAATTTT GGTGATTTAG CGAAGCCTGC AACAGTTTTA
ATTGAAAAGG TTTCAAATGC TATCGGTGTA CTTTATGAGC CAAGAAGAAT TCGCAAAAAA
GCTGAAGCAG AGGTAGAAGC CGAGAAAATA AAGGTGCTTG CTGGCATAGA ACTAAATGAA
ATCCAACAAA GAGGCATTGA GAGATTTGTC CAGCAAGAAG CACGTAAACA AGCTAATATT
GAAGCAATTA CGGCACAGGC TGCTTCTCAA TTAGATGAAT CAGCTAAAAC TGATAACTTA
GAAGAGGATT GGATTGCCCA TTTCTTTGAT AAATGTGACA AAGTCTCAGA TGCAGAAATG
CAAACGTTAT GGTCTAGTTT ACTTGCAGGA GAAGCCCAAA ACCCAGGAAC ATATTCAAAA
AGGACTGTTG ACTTTGTTGC TACCATGGAC AAGAAAGACG CAGAGCTGTT TACTAATTTT
TGTCAGTTTG TATGGATGGT TGGAGGTGCA ACCCCGTTGA TATTTGACTT TGAAAATGAA
ATATATACCA AAAATGGTAT TAATTTCGCT TCGTTAAAAC ATCTTGATGC TATTGGTCTG
ATTTCATTTG AAAGTCTTTC GGGATATAGG CGTTTTGGAT TGCCCAAAAA AGCTGTTTTC
TTCTACTACG GTCAGCCGAC TTTAGTTGAA TTTGAAAATG ACAATAATAA CGAGGTTCAA
ATTGGTAAAG TCCTTTTTAC TAAAGCTGGG CTTGAACTTA TAAATATCTG TGGCGCTAAA
CGTAGCCAAG AGTTTTATGA ATATTCAGTT TCTGAGCTAT CTAAGCAAGG ATTAATCCTG
TCGAGTTTAC TTGCCTAA
|
|---|
| Protein sequence | MSDGNSVINF GDLAKPATVL IEKVSNAIGV LYEPRRIRKK AEAEVEAEKI KVLAGIELNE
IQQRGIERFV QQEARKQANI EAITAQAASQ LDESAKTDNL EEDWIAHFFD KCDKVSDAEM
QTLWSSLLAG EAQNPGTYSK RTVDFVATMD KKDAELFTNF CQFVWMVGGA TPLIFDFENE
IYTKNGINFA SLKHLDAIGL ISFESLSGYR RFGLPKKAVF FYYGQPTLVE FENDNNNEVQ
IGKVLFTKAG LELINICGAK RSQEFYEYSV SELSKQGLIL SSLLA
|
|---|
| |