| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0746 |
|---|
| Symbol | |
|---|
| ID | 5135058 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009456 |
|---|
| Strand | - |
|---|
| Start bp | 803419 |
|---|
| End bp | 803940 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640531068 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001215582 |
|---|
| Protein GI | 147672063 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.115392 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAAAG TCATAGATGT TGATTTTGTC TCAGACCATA CATTAGAACT GACGTTCAAT
GATGGTTACC AAGGCTATGC CGACTTGTCG GTATACTTTA AAAAAGCACC GTTTTCAGAA
ATTAAGGACT TTAAACGCTT TTCCTTGACT CGTGATGGCT CGTTAAATTG GGATGGTAAT
GAGTTAACGG CCGCGACACT CCGTGACATA ACCAAGGGCT CACAAAAGTC GGTGGAGTTA
AGTTTTAATG TTCAAGAAAT GGAAGCCGTC ATCAAACAGG CCTCATGGGA ATCGATGATG
GAGGGGCGTC CCGACATCTT GCAAGCGGCT ATTCGTTCTT ACGTAGAGCA GTTTGGTCAT
GGTCAAGTTA TTGCAAAGGC GGGTATAAAA AGTCGTACGA GTGCTTATCG CTCCTTGAAG
CCAGAAACAA CGCCAAACTT TGGCACACTA GTTCAGTTAG GGCACGCCGT CATCGAACTA
GCGAAAGATA GAACAGTGGC AAACAAGGAA CCACGCATAT AA
|
|---|
| Protein sequence | MLKVIDVDFV SDHTLELTFN DGYQGYADLS VYFKKAPFSE IKDFKRFSLT RDGSLNWDGN
ELTAATLRDI TKGSQKSVEL SFNVQEMEAV IKQASWESMM EGRPDILQAA IRSYVEQFGH
GQVIAKAGIK SRTSAYRSLK PETTPNFGTL VQLGHAVIEL AKDRTVANKE PRI
|
|---|
| |