Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0741 |
Symbol | |
ID | 5135049 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | - |
Start bp | 800942 |
End bp | 801535 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640531063 |
Product | putative acetyltransferase |
Protein accession | YP_001215577 |
Protein GI | 147671534 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 0.871349 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGTTACGG TTGTTGTGTT TGAGTTTAGT GTTATGCGTT GTCAGCCCCT TAGGCGGGCG TTATGCAGTT ATTTGAGCAT GGATGAAAAA GTGATTATTA GAAAATTAAC AGTCGAAGAT GCAGAGTCAG TATTGTCATT AATGTACCAA TTAGATCGAG AGTCTAAATT CATGCTGCTT GAACCAGAAG AAAGGACAAC CACACTGGAG CAGCAAATCC AAATTATTCA CTCATTCAAT GATTCATCTA ATAAGGTGAT ATATTTACTG ACCAATGATG AAAAGGCTTT TGGTTTCATT GTCGGTGTAG GTAATACAGC CAATCGCAAT AAACACTGCA TGTCTTTGGT CATTGGCCTT CTCCAAGCTG TTACAGGCCA AGGATTTGGA AAAGAATTAG TAAACAAGCT TGAAGGTTGG GCGATTTCTC ATGGATATAG CCGGCTAGAG TTGACCGTAA TGCAGCACAA CGAGAGAGCT AAAAGGCTTT ATGAATCATG TGGTTTTGAA GTTGAGGGTT TAAAGCGCCA TTCTCTGGTT GTCGATGGTG AGTATGTTAA TGAGCTGTAC ATGTCTAAGC TATTAACCGC ATAA
|
Protein sequence | MVTVVVFEFS VMRCQPLRRA LCSYLSMDEK VIIRKLTVED AESVLSLMYQ LDRESKFMLL EPEERTTTLE QQIQIIHSFN DSSNKVIYLL TNDEKAFGFI VGVGNTANRN KHCMSLVIGL LQAVTGQGFG KELVNKLEGW AISHGYSRLE LTVMQHNERA KRLYESCGFE VEGLKRHSLV VDGEYVNELY MSKLLTA
|
| |