Gene VC0395_0729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0729 
Symbol 
ID5134829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand+ 
Start bp792003 
End bp792590 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content49% 
IMG OID640531051 
Producthypothetical protein 
Protein accessionYP_001215565 
Protein GI147671558 
COG category[S] Function unknown 
COG ID[COG3647] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCTTGT CGCGACCTCT CATCGGATTG ACCCTTTTTT ATAGCTTAAT TTTTGTTTTT 
TCAGCCATAG CACCTACTTC ACGTGCGGTT TGGTTTGCCG AAATCATCCC CGCCATTCTG 
GTTCTGGCCA CAATTTGGTG GGTCTCATTG CGCTGGTCAA TGAGCACGAC CGCCTATGTC 
TTGATGTTTG TTTGGCTCTG CTTGCATACC ATAGGCGCAA AATACACCTT CGCTGAAGTC 
CCTTTTGACT GGTTCAATAC CTTGATCGGC TCTACACGCA ATCAATTCGA TCGCGTCGCC 
CACTTTTCCA TCGGTCTTTA TGCTTACCCT ATTGCGGAAT GGCTGTTACG TAAGCAACAA 
ACGAAACCTT GGCTAGCTTA CAGCTTTGCA CTATTTAGCT TGATGAGTCT TGCAGCGGCT 
TACGAAATTA TCGAGTGGTG GTACGCCGCG CTCGCTGGCG GCGAAGAAGG GATCGCATTT 
TTGGGCTCAC AAGGGGATAT TTGGGATGCT CAGAAAGATA TGCTGTGCGA TACCTTAGGT 
GCCATCACCG CACTTTGCCT ACTTGCGTGG CAGCGAGCCA GAGGCTAA
 
Protein sequence
MPLSRPLIGL TLFYSLIFVF SAIAPTSRAV WFAEIIPAIL VLATIWWVSL RWSMSTTAYV 
LMFVWLCLHT IGAKYTFAEV PFDWFNTLIG STRNQFDRVA HFSIGLYAYP IAEWLLRKQQ 
TKPWLAYSFA LFSLMSLAAA YEIIEWWYAA LAGGEEGIAF LGSQGDIWDA QKDMLCDTLG 
AITALCLLAW QRARG