| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0708 |
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| Symbol | |
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| ID | 5134986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 768982 |
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| End bp | 769716 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640531030 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001215544 |
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| Protein GI | 147672227 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGAAA AAAAACAGGG GCGTCGTAGT GCGCAAGATG CCCAAAAAAC GCGTTATCAC
ATTATCACCA TTGCGGCAGA GCTGTTCTGT GAGCTCGGTT ATTCACGCGT TTCTCTGCGC
CATATCAGTG AAAAGGCTGG CGTCTCACAT AGCTTGATTC GTCATCATTT CGGCAGTAAA
GAAAAGATCT GGCACAGCAT CAGCGATGGC CTGCATGATT ATATGATTCG CTACATGCAG
ACGGTGCTCC AAGCCATGCC AGCAGAAACT CCCGTCAATG TAAAGCTGTA CACTTTCCTC
ATGCGCATGT TGGCACATGG CTTAATCATT AAACAGCCAA TCCAATTGAT TGCGGATGCC
GTACGCCAAG AAGATAAATT ATTCGATTAT TTCCTCGATA CTTCTGGAGA GATTGAACGC
TTGGTTGAAT CCTTGGCGGA CGACTACAAC CGTCAGTACC CCCAATCTCC GATCCATTTG
TGGGAAATCA AATGGCAGCT GATTATGTAC ACTCACAGCG CCGCCAGTTT GACGCCTTTT
ATGCGTGCAA CTTGGGCCCC GGAAATTGAA GACGTTTCCG CCTGTTTACT CAAACATTGG
CAGTTGTTTA ACGCTTTGAT GGTTGAGAAG TTTCATGTCG CCAAGCCTTA CATTATGCAG
CCCAACTCGG TGGATGAGCT GGTGTATACC CTCAGTTGCG ACTGGCGAGA TGTCTATAAA
GAGACGGAAG AGTAA
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| Protein sequence | MIEKKQGRRS AQDAQKTRYH IITIAAELFC ELGYSRVSLR HISEKAGVSH SLIRHHFGSK
EKIWHSISDG LHDYMIRYMQ TVLQAMPAET PVNVKLYTFL MRMLAHGLII KQPIQLIADA
VRQEDKLFDY FLDTSGEIER LVESLADDYN RQYPQSPIHL WEIKWQLIMY THSAASLTPF
MRATWAPEIE DVSACLLKHW QLFNALMVEK FHVAKPYIMQ PNSVDELVYT LSCDWRDVYK
ETEE
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