Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0706 |
Symbol | ybjU |
ID | 5134314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | + |
Start bp | 767410 |
End bp | 768441 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640531028 |
Product | L-allo-threonine aldolase |
Protein accession | YP_001215542 |
Protein GI | 147672432 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2008] Threonine aldolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCGGATAT TTGTAGGAGA AAATATGGAC TTTCGATCGG ATACCGTTAC CCAACCGACC GACGCGATGC GTCAAGCGAT GGCACAAGCC CCTGTGGGTG ACGATGTGTA TGGCGATGAC CCCACCGTCA ACGAGTTAGA ACAGTGGGCG GCAGAGCGCC ATGGCTTTGA AGCCGCGCTG TTTACCACCT CAGGCACTCA AGCCAATTTG TTAGGTTTAC TCGCCCATTG CGAACGCGGC GACGAATATT TGTGTGGCCA GCAAGCCCAT AACTATCGTT ATGAAGCTGG CGGTGCTGCC GTACTTGGCT CTATCCAGCC ACAACCGATT GACAATGAAC CGGATGGCAC ACTCGATTTC GCCAAACTCA AAGCCGCGAT CAAACCGGAT GATGCACATT TTGCCCGCAC CAAACTGCTC AGCTTGGAAA ACACCATCAA TGGTAAAGTG CTTCCACTCA GTTATTTGGC GAAGGCGCGC GAGTTTGTTG ATCAACATGG TTTGCAACTG CACCTTGATG GGGCTCGGGT CTACAACGCG GCGGTCGCAC TGGATGTGGA TGTCAAAGAG ATCGCGCAAT ATTTTGATTC GATCACCGTG TGTCTATCCA AAGGCTTAGC CGCGCCAGTC GGTTCGTTAC TGCTCGGTTC CAAGGACTTT ATTGCCAAAG CGAGACGCTG GCGAAAAATG GTCGGTGGCG GTATGCGCCA AGCGGGCATT TTAGCCGCAG CGGGGAAATT GGCGCTCACC GAGCAAGTCA TGCAGCTCAA GACCGATCAT GATAATGCTC GTCATCTGGC TTTGGGGCTG AATGCTTTAC CGGGGTTTTC GGTTAATACC GAATGGGTAC AGACCAATAT TGTGTTTGCT AAATTGGACT CGACAGTCGA TATCCAGTCC ATCGCCCAGC AACTTCGCCA AGCAGGCATT ATCATCACCG CGGGTAATCC AGTGCGCTTC GTGACACATA AAGACATTAC ACGTCAGGAT ATTGATACCC TACTCGCCAA ACTGCGCACC TTACTGGCTT GA
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Protein sequence | MRIFVGENMD FRSDTVTQPT DAMRQAMAQA PVGDDVYGDD PTVNELEQWA AERHGFEAAL FTTSGTQANL LGLLAHCERG DEYLCGQQAH NYRYEAGGAA VLGSIQPQPI DNEPDGTLDF AKLKAAIKPD DAHFARTKLL SLENTINGKV LPLSYLAKAR EFVDQHGLQL HLDGARVYNA AVALDVDVKE IAQYFDSITV CLSKGLAAPV GSLLLGSKDF IAKARRWRKM VGGGMRQAGI LAAAGKLALT EQVMQLKTDH DNARHLALGL NALPGFSVNT EWVQTNIVFA KLDSTVDIQS IAQQLRQAGI IITAGNPVRF VTHKDITRQD IDTLLAKLRT LLA
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