Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0700 |
Symbol | artI |
ID | 5134549 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | - |
Start bp | 761320 |
End bp | 762051 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640531022 |
Product | arginine ABC transporter, periplasmic arginine-binding protein |
Protein accession | YP_001215537 |
Protein GI | 147671951 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.347684 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGA TCCTACTCGC GTCTTTGATT GGTTTGGTTT CTGCTAGCGC AGCTGCGCAA CAAGAGATCA AGTTTGTGAT GGAAGCGACT TACGCGCCGT TCGAATACAT GGATGAGAAC AACCAAATCC AAGGTTTTGA TGTGGATTTA GCCAATGCGC TGTGTAAGCA ACTTGAAGCG AAATGTAGCT TCCACAACCA AGCGTTTGAC AGCTTGATCC CAGCACTGAA ATTCAAACGT TATGATGCCG CCATTTCGGC AATGGACATC ACCGAAGCGC GTTTAGAGCA GGTAAATTTC TCCAATCCGT ACTACGACAA CTCAGCCGCC TTCGTTTCTC TGGCGGGCAA AGTGGCGGAT CAAGCGGCGC TGAAAGGCAA ACGTGTTGGT GTGCAAAATG GCTCGACTCA CCAAAGTTTC CTACTTGAGC AACTGTCGGA CGTGGTCGCG GTGCCATACT CAAGCTACCA AGATGCGTTC ATCGATATGA AAAATGGCCG TATTGATTCG GTATTCGGTG ACACGGCCGT TGTCGCGGAG TGGTTTAAGG GGGATAACAA CCTCGCTTAC GTCGGTGAGC GTGTCACGAA TGCACAGTAC TTCGGTAATG GCTTTGGTAT TGCGGTGAAT AAAGATAACC AAGCGCTGCT TGATCAACTT AACGCAGCGT TGGAAGCCGT GAAAGAAAAT GGCGAATACG CCGCGATCTT CAATAAGTAC TTCGGAAACT AA
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Protein sequence | MKKILLASLI GLVSASAAAQ QEIKFVMEAT YAPFEYMDEN NQIQGFDVDL ANALCKQLEA KCSFHNQAFD SLIPALKFKR YDAAISAMDI TEARLEQVNF SNPYYDNSAA FVSLAGKVAD QAALKGKRVG VQNGSTHQSF LLEQLSDVVA VPYSSYQDAF IDMKNGRIDS VFGDTAVVAE WFKGDNNLAY VGERVTNAQY FGNGFGIAVN KDNQALLDQL NAALEAVKEN GEYAAIFNKY FGN
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