| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0617 |
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| Symbol | napA |
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| ID | 5134168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 673064 |
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| End bp | 675553 |
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| Gene Length | 2490 bp |
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| Protein Length | 829 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640530939 |
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| Product | nitrate reductase catalytic subunit |
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| Protein accession | YP_001215456 |
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| Protein GI | 147671794 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01706] periplasmic nitrate reductase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATGA CCAGACGTGC GTTTGTGAAA GCAAACGCAG CCGCCTCAGC TGCGGCGGTT
GCAGGGATCA CCCTCCCCGC ATCTGCCACC AACTTGATCG CTAGCTCCGA TCAAACCGCA
ATTCATTGGG ACAAAGCACC TTGCCGTTTT TGTGGTACAG GCTGTTCTGT GCTGGTCGGA
ACCCAAGATG GTCGCGTTGT CGCCACACAA GGTGATCCTG AAGCTCCAGT AAACAAAGGC
CTTAACTGCA TTAAGGGCTA CTTCCTCTCC AAAATCATGT ACGGTCAAGA TCGCTTAAAA
ACGCCGCTGC TGCGCATGAA AGATGGTCAA TACCACAAAG ACGGTGAATT CACCCCAGTC
TCTTGGGATA CCGCATTTGA TGTGATGGCT GAAAAATGGA AAGCTTCGCT TAAAACCAAA
GGCCCAACCA GCGTGGGTAT GTTCGGTTCT GGCCAGTGGA CAGTGATGGA AGGTTACGCG
GCGGTGAAGC TGATGAAAGC GGGCTTTCGT TCTAACAACA TTGACCCCAA CGCACGTCAC
TGTATGGCTT CTGCGGTAGT GGGCTTTATG CGTACCTTTG GTATTGATGA GCCTATGGGC
TGTTATGACG ACTTTGAACA CGCCGATGCG TTTGTGCTTT GGGGTTCCAA CATGGCGGAA
ATGCACCCAG TGCTCTGGAC GCGCATTACT GACCGTCGCC TAAGCCATCC TCATGTCAAA
GTGAATGTGC TCTCAACGTA TTACCACCGT TCCTTTGAGT TGGCGGATCA TGGCTACATT
TTCCACCCAC AGTCTGACTT AGCGATTGCC AACTTCATCG CCAACTACAT CATTCAAAAC
GATGCGGTGA ACTGGGACTT TGTCAACAAG CACACCCATT TCAAACAAGC GGTCACAGAC
ATCGGTTACG GTCTGCGTGA CGATCACCCT CTACAGAAAA AGGCGAAAAA CGCCAACTCC
GGTGATGTCA GCGATATTTC GTTTGAAGAG TACAAAAAAT CGGTTGCGCC TTACACGGTT
GAAAAAGCGT CTGAAATTTC CGGAGTATCA CCGGATAAAC TGATCACGCT CGCGAAGCAG
TATGCCGATC CAAACACCAA AGTGATGTCA CTCTGGACCA TGGGGATGAA CCAACATACT
CGCGGTGTCT GGATGCAAAG CTTGGTGTAC AACCTGCACT TACTTACTGG CAAAATCGCC
ACTCCAGGCA ACAGCCCATT CTCACTGACC GGTCAGCCAT CAGCCTGTGG TACGGCGCGT
GAAGTGGGTA CCTTTGCACA CCGTCTGCCA GCCGACATGG TGGTGGCTAA CCCTAAACAC
CGTGCGATTG CCGAAAAAGT GTGGAAATTG CCTGAAGGCA CGATTCCTGA GAAACCGGGC
TTCCATGCGG TGCAGCAAGA CCGCATGCTC AAAGACGGCG TACTGAACTG TTACTGGGTG
CAATGTAATA ACAACATGCA AGCCGGTCCA AACATCAATG AAGAGCGTTT ACCGGGCTAC
CGCAACCCTG AAAACTTCAT TGTGGTATCG GATGCTTACC CAACCGTAAC GGCGCAAGCG
GCTGACCTTG TTTTGCCAAC CGCCATGTGG GTAGAAAAAG AAGGCGCGTA CGGCAACGCC
GAGCGCCGTA CCCAAGTGTG GTATCAACAA GTGAAGACTG TCGGTGAATC TCACTCCGAC
TCATGGCAAG TGATTGAGTT TTCAAAACGC TTCAAAGTCG AAGACGTGTG GCCGGAAGAA
CTGCTGGCAA AAGCACCGCA ATACCGCGGC AAAACCCTGT ATGACGTGCT GTTCAAAAAC
GGTCAGGTGG ACAAGTTCCC ACTGAGCGAA GCACGTGAAC TCAACGATGA TGCGCACCAC
TTTGGTTTCT ATATCCAAAA AGGTCTGTTT GAAGAGTATG CCGAGTTTGG CCGCGGCCAT
GGTCACGATT TAGCGCCTTA CGATGTTTAC CACCAAGTAC GCGGCCTGCG TTGGCCGGTT
GTCGATGGCA AAGAAACTAA ATGGCGCTTT AAAGAAGGCT CTGACCCTTA TGCCAAAGCC
GGTTCAGGTT GGGATTTCTA CGGCAAACCG GATGGCAAAG CGTGGATCAT CTCCTCACCT
TATGAAGCGC CGCCAGAAAT GCCCAATGAA GAGTACGATT TATGGCTCTG TACTGGCCGT
GTTCTTGAGC ACTGGCACAC TGGCACTATG ACCCGTCGTG TCCCTGAGCT GTATAAAGCG
GTACCGGATG CGCTGTGCTT TATGCACCAT GAAGACGCGC AAGCGCGCGG TTTACGCCGT
GGCGATGAAG TGCTGATCTC CAACTCGCGT GGTGAAGTTC GAGTGCGCGT AGAAACTCGC
GGTCGTAATA AGCCGCCAAA AGGCTTGGTG TTCGTGCCTT TCTTTGATGC TCGCATTTTG
GTCAACAAGT TAATCCTCGA TGCGACCGAC CCACTCTCGA AGCAGACTGA CTTCAAGAAG
TGTCCGGTTA AGATCACCAA AGTCGCGTAA
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| Protein sequence | MKMTRRAFVK ANAAASAAAV AGITLPASAT NLIASSDQTA IHWDKAPCRF CGTGCSVLVG
TQDGRVVATQ GDPEAPVNKG LNCIKGYFLS KIMYGQDRLK TPLLRMKDGQ YHKDGEFTPV
SWDTAFDVMA EKWKASLKTK GPTSVGMFGS GQWTVMEGYA AVKLMKAGFR SNNIDPNARH
CMASAVVGFM RTFGIDEPMG CYDDFEHADA FVLWGSNMAE MHPVLWTRIT DRRLSHPHVK
VNVLSTYYHR SFELADHGYI FHPQSDLAIA NFIANYIIQN DAVNWDFVNK HTHFKQAVTD
IGYGLRDDHP LQKKAKNANS GDVSDISFEE YKKSVAPYTV EKASEISGVS PDKLITLAKQ
YADPNTKVMS LWTMGMNQHT RGVWMQSLVY NLHLLTGKIA TPGNSPFSLT GQPSACGTAR
EVGTFAHRLP ADMVVANPKH RAIAEKVWKL PEGTIPEKPG FHAVQQDRML KDGVLNCYWV
QCNNNMQAGP NINEERLPGY RNPENFIVVS DAYPTVTAQA ADLVLPTAMW VEKEGAYGNA
ERRTQVWYQQ VKTVGESHSD SWQVIEFSKR FKVEDVWPEE LLAKAPQYRG KTLYDVLFKN
GQVDKFPLSE ARELNDDAHH FGFYIQKGLF EEYAEFGRGH GHDLAPYDVY HQVRGLRWPV
VDGKETKWRF KEGSDPYAKA GSGWDFYGKP DGKAWIISSP YEAPPEMPNE EYDLWLCTGR
VLEHWHTGTM TRRVPELYKA VPDALCFMHH EDAQARGLRR GDEVLISNSR GEVRVRVETR
GRNKPPKGLV FVPFFDARIL VNKLILDATD PLSKQTDFKK CPVKITKVA
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