Gene VC0395_0581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0581 
Symbol 
ID5134236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp632328 
End bp632981 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content50% 
IMG OID640530903 
Productdihydropteridine reductase 
Protein accessionYP_001215420 
Protein GI147671715 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATTG TACAAGCGTC GCAGTCTCGC TATTCCACCA AAGCGTTTGA CGCCAGCCGC 
AAGCTATCTG AACAGCAAGT CGCCGATCTC AAAGAGTTGG TACGCATGAG TGCCTCTAGC
GTGAACTCAC AACCTTGGCA TTTTATTTTG GCCGGCAGTG ATGAAGGCAA AACACGCATT
GCCAAAGCTA CGCAGGGCGG TTTTTCGTTT AATGAGCGCA AAATTTTAGA TGCCTCGCAC
GTGATGGTGT TCTGCGCCAA AACCAGCATT GATGACGCGT ATCTGCTCTC TCTGCTGGAC
AACGAAGATA AAGATGGCCG TTTTGCGAAT GAAGAAGCCA AAACCGGCAT GCATGGCGCG
CGTAGCTACT TTGTAAACTT GCACCGTGAA AACCTGAACG ATGCTGAGCA CTGGATGCAA
AAACAAGTTT ACCTCAACGT GGGTACACTG CTGCTTGGTG CTGCAGCCAT GGGCATTGAT
GCGGTGCCGA TTGAAGGCTT TGATGCTCAA GTGCTAAACG AAGAGTTTGG CTTAACCGAA
AAAGGCTTCA ACAGTGTGGT GATTGTGCCA CTAGGTTTCC ACAGTGAAGA CGACTTCAAC
GCCAAACTGC CTAAATCACG TTGGCCGGCG GAAGCGGTCT TTACCGAGCT GTAA
 
Protein sequence
MNIVQASQSR YSTKAFDASR KLSEQQVADL KELVRMSASS VNSQPWHFIL AGSDEGKTRI 
AKATQGGFSF NERKILDASH VMVFCAKTSI DDAYLLSLLD NEDKDGRFAN EEAKTGMHGA
RSYFVNLHRE NLNDAEHWMQ KQVYLNVGTL LLGAAAMGID AVPIEGFDAQ VLNEEFGLTE
KGFNSVVIVP LGFHSEDDFN AKLPKSRWPA EAVFTEL