Gene VC0395_0575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0575 
Symbol 
ID5134146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp629330 
End bp629779 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content52% 
IMG OID640530897 
ProductMutT/nudix family protein 
Protein accessionYP_001215414 
Protein GI147671886 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID[TIGR00586] mutator mutT protein 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCTGTAG AAAAAACCGA GCCTGTAGAG AAAACGCCAA CAAGATTGCC CGTGGCAGAA 
TGTGTCTCTT TTTTGCTGGT CAAAGAGGGC AGTTGTCTGC TCGAACGTCG CTCAGCAACC
AAAGCGAGCG ATCCTAATAT CATCGCGATC CCCGGTGGGC ATATCGAAGC GGGAGAAAAC
CAAGCGCAAG CGTTGCAGCG TGAAGTGCAA GAAGAGTTAG GCGTGGACGC TACGCGCAGC
GTTTATCTCT GCTCGCTTTA TCATCCGACA GAATTTGAGC TGCAACTGCT GCACTATTAC
GTGGTGGATC AATGGCAAGG TGAGATCGCC TGCCACGAAG CGGATGAAGT TTTTTGGACG
CCGATTGCGC CAAGTGCGGT GGAAACCATT GCCGATAAAA TCGCGATTCA AGAGTTCCAA
CGCCTGTATC CACGCTATCT GGCGCTGTAA
 
Protein sequence
MSVEKTEPVE KTPTRLPVAE CVSFLLVKEG SCLLERRSAT KASDPNIIAI PGGHIEAGEN 
QAQALQREVQ EELGVDATRS VYLCSLYHPT EFELQLLHYY VVDQWQGEIA CHEADEVFWT
PIAPSAVETI ADKIAIQEFQ RLYPRYLAL