Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0565 |
Symbol | tktA-2 |
ID | 5134628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | + |
Start bp | 618853 |
End bp | 620895 |
Gene Length | 2043 bp |
Protein Length | 680 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640530887 |
Product | transketolase |
Protein accession | YP_001215404 |
Protein GI | 147671641 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0021] Transketolase |
TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTTGAACG CACTCCGTTC AACCTCCTTT ATTGAAATGA GTAACACTAT GAATCGCAAA CAACTTGCCA ATGCTATCCG CGCCCTGAGC ATGGACGGCG TTCAAAAAGC TAACTCTGGT CACCCGGGAG CCCCAATGGG CATGGCGGAT ATCGCCGAAG TGCTGTGGCG TTCACACTTA AACCACAACC CACAAAACCC AAATTGGGCT GACCGCGACC GTTTCGTACT GTCTAACGGC CACGGCTCTA TGCTGATTTA CTCGCTGCTA CACCTGAGCG GCTATGAGCT GTCGATTGAC GATTTGAAAA ACTTCCGTCA ACTACACTCC AAAACACCGG GTCACCCAGA GTACGGTTAT GCACCGGGCA TCGAAACGAC TACGGGCCCA CTCGGCCAAG GCATCACCAA TGCCGTAGGT ATGGCGATTG CTGAAAAAGC TCTGGCGGCG CAGTTCAACA AACCGGGTCA CGACATCGTT GACCACTTCA CTTATGTGTT TATGGGTGAC GGTTGTTTGA TGGAAGGCAT TTCGCACGAA GCGTGTTCAC TGGCGGGCAC ACTTGGCCTT GGCAAACTGA TTGCGTTCTG GGATGACAAC GGTATTTCTA TTGATGGTCA CGTGGAAGGC TGGTTCTCAG ACGACACGCC AAAACGTTTT GAAGCGTACG GCTGGCATGT TATCCCTGCG GTTGATGGCC ACGATGCAGA TGCGATTAAC GCTGCGATTG AAGCCGCGAA AGCAGAAACC TCTCGCCCAA CGCTGATTTG TACCAAAACC ATCATCGGTT TCGGCTCACC AAACAAAGCG GGTTCACACG ACTGTCACGG CGCACCTCTG GGCAACGATG AAATCAAAGC CGCGCGTGAA TTCTTGGGTT GGGAATACGC TCCGTTTGAA ATCCCGGCTG ACATCTACGC AGCGTGGGAT GCAAAACAAG CAGGCGCAAG CAAAGAAGCC GCTTGGAATG AGAAATTCGC CGCTTACGCG AAAGCTTACC CAGCCGAAGC TGCTGAATAC AAACGCCGCG TAGCGGGCGA GCTGCCAGCG AATTGGGAAG CCGCAACCAG CGAGATTATC GCTAACCTGC AAGCTAACCC TGCCAACATC GCATCGCGTA AAGCATCACA AAATGCGCTG GAAGCGTTCG GCAAACTGCT GCCAGAATTT ATGGGTGGTT CTGCTGACTT GGCGCCTTCT AACCTCACCA TGTGGTCTGG CTCTAAGTCA CTGACAGCAG AAGATGCGTC AGGCAACTAC ATCCACTACG GTGTGCGTGA GTTTGGTATG ACGGCCATCA TCAACGGTAT CGCGCTGCAC GGCGGTTTTG TCCCTTACGG TGCAACCTTC CTGATGTTTA TGGAATACGC GCGTAACGCG ATGCGTATGG CAGCACTGAT GAAAGTGCAA AATATCCAAG TGTACACGCA TGACTCTATC GGTCTGGGTG AAGATGGCCC AACTCACCAA CCAGTTGAGC AAATCGCTTC TCTGCGTATG ACACCAAACA TGAGCACATG GCGCCCATGT GACCAAGTGG AATCGGCAGT GGCTTGGAAA CTGGCCATCG AGCGTAAAGA TGCGCCATCT GCGCTGATTT TCTCGCGTCA AAACCTTGCG CAGCAACCAC GCAGCGCAGA GCAAGTCGCG AACATCGCTA AAGGCGGTTA CATCCTGAAA GATTGTGCAG GCCAACCTGA GCTAATTCTG ATTGCAACAG GCTCTGAAGT GGAACTGGCG GTTGCCGCTT ACGAGCAACT GAGCGCCGAA GGCAAAGCGG TTCGCGTGGT CTCTATGCCA TCGACCGACG CATTTGATAA GCAAGATGCC GCTTACCGCG AAGCCGTTCT GCCAGCGGCA GTCACCAAGC GTATCGCGAT TGAAGCGGGT ATTGCAGACT TCTGGTACAA GTACGTCGGC TTTGGCGGTC GCATCATCGG TATGACCAGC TTCGGCGAAT CAGCACCAGC CGGTGAGCTG TTCAAACTGT TTGGTTTCAC GACTGAAAAC GTAGTGAAAC AAGCCAAAGA ACTGCTGGCG TAA
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Protein sequence | MLNALRSTSF IEMSNTMNRK QLANAIRALS MDGVQKANSG HPGAPMGMAD IAEVLWRSHL NHNPQNPNWA DRDRFVLSNG HGSMLIYSLL HLSGYELSID DLKNFRQLHS KTPGHPEYGY APGIETTTGP LGQGITNAVG MAIAEKALAA QFNKPGHDIV DHFTYVFMGD GCLMEGISHE ACSLAGTLGL GKLIAFWDDN GISIDGHVEG WFSDDTPKRF EAYGWHVIPA VDGHDADAIN AAIEAAKAET SRPTLICTKT IIGFGSPNKA GSHDCHGAPL GNDEIKAARE FLGWEYAPFE IPADIYAAWD AKQAGASKEA AWNEKFAAYA KAYPAEAAEY KRRVAGELPA NWEAATSEII ANLQANPANI ASRKASQNAL EAFGKLLPEF MGGSADLAPS NLTMWSGSKS LTAEDASGNY IHYGVREFGM TAIINGIALH GGFVPYGATF LMFMEYARNA MRMAALMKVQ NIQVYTHDSI GLGEDGPTHQ PVEQIASLRM TPNMSTWRPC DQVESAVAWK LAIERKDAPS ALIFSRQNLA QQPRSAEQVA NIAKGGYILK DCAGQPELIL IATGSEVELA VAAYEQLSAE GKAVRVVSMP STDAFDKQDA AYREAVLPAA VTKRIAIEAG IADFWYKYVG FGGRIIGMTS FGESAPAGEL FKLFGFTTEN VVKQAKELLA
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