Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0549 |
Symbol | |
ID | 5134152 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | + |
Start bp | 605616 |
End bp | 606023 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640530871 |
Product | nucleoside diphosphate kinase regulator |
Protein accession | YP_001215388 |
Protein GI | 147672055 |
COG category | [K] Transcription |
COG ID | [COG0782] Transcription elongation factor |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000000000000352077 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTCAAC TTAATACTAT CGTGGTGTCC ACTCGCGATA TGGACAGAAT CAGCCAGTTG ATGGATAACC TAGCCACTTT GTCGCCAGAG CTAGAGAAAC TGGAAGAAGA ATTGGATCGC GCCACTGTGC TCGAACCTGC AGAGATGCCA GAGGATGTCG TCACTATGAA TTCTACGGTG CGCTTTAAAT TTTTGGGCAG CGATGAAGTG ATGGAAAAAA CCTTGGTGTA TCCAAACGAT GTGAAAAGCA GCGCGGATGT TTCGATTTTC GCCCCTGTGG GAAGCGCATT GCTTGGTTTA GCAGTCGGTC AACAACTGGC TTGGCCAATG CCGGGCGGTA CTCTCAAAAC CCTCGAAATC ATCGATATCG TCTATCAACC TGAACGCGCT GGCGAATTCC ACCGTTAA
|
Protein sequence | MSQLNTIVVS TRDMDRISQL MDNLATLSPE LEKLEEELDR ATVLEPAEMP EDVVTMNSTV RFKFLGSDEV MEKTLVYPND VKSSADVSIF APVGSALLGL AVGQQLAWPM PGGTLKTLEI IDIVYQPERA GEFHR
|
| |