Gene VC0395_0549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0549 
Symbol 
ID5134152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp605616 
End bp606023 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content49% 
IMG OID640530871 
Productnucleoside diphosphate kinase regulator 
Protein accessionYP_001215388 
Protein GI147672055 
COG category[K] Transcription 
COG ID[COG0782] Transcription elongation factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000000352077 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCAAC TTAATACTAT CGTGGTGTCC ACTCGCGATA TGGACAGAAT CAGCCAGTTG 
ATGGATAACC TAGCCACTTT GTCGCCAGAG CTAGAGAAAC TGGAAGAAGA ATTGGATCGC
GCCACTGTGC TCGAACCTGC AGAGATGCCA GAGGATGTCG TCACTATGAA TTCTACGGTG
CGCTTTAAAT TTTTGGGCAG CGATGAAGTG ATGGAAAAAA CCTTGGTGTA TCCAAACGAT
GTGAAAAGCA GCGCGGATGT TTCGATTTTC GCCCCTGTGG GAAGCGCATT GCTTGGTTTA
GCAGTCGGTC AACAACTGGC TTGGCCAATG CCGGGCGGTA CTCTCAAAAC CCTCGAAATC
ATCGATATCG TCTATCAACC TGAACGCGCT GGCGAATTCC ACCGTTAA
 
Protein sequence
MSQLNTIVVS TRDMDRISQL MDNLATLSPE LEKLEEELDR ATVLEPAEMP EDVVTMNSTV 
RFKFLGSDEV MEKTLVYPND VKSSADVSIF APVGSALLGL AVGQQLAWPM PGGTLKTLEI
IDIVYQPERA GEFHR