| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0532 |
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| Symbol | |
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| ID | 5135008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 585510 |
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| End bp | 587102 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640530854 |
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| Product | putative peptide ABC transporter, ATP-binding protein |
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| Protein accession | YP_001215371 |
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| Protein GI | 147671428 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4172] ABC-type uncharacterized transport system, duplicated ATPase component |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGATT GGGTATTGAA GATAGATAAC CTGTCGGTGG GCTTTGGTAT CGCAGGGCAG
GCACGCCCTG TGACGGAAGG GGTAAGCTTA ACCATTGCGC GTGGTGAAAC GTTGGCTTTG
GTGGGAGAAA GTGGCTCGGG AAAATCCGTG ACAGCCAACG CGATTTTGCG TTTGTTGCCC
AAAGGATCGG CGCACTATTT AAGTGGCAGC ATTCATTTTG GCGATGTAGA TACCCTGCGC
TGCTCAGAGC GCGCGCTGCG CGGCATCCGC GGGGGACGCA TAGGGATGAT TTTTCAAGAG
CCGATGGTCT CGCTTAATCC TCTGCACAAA ATTGGAAAAC AGTTGGTGGA AACCTTAGCG
ATCCATCGAG GATTACGTGC AACGGCAGCA GAGCAAAAAG CGATTGAATG GCTTGGCAAG
GTGGGGATTC GTCATCCTGA AATTAAGATC AATGCCTATC CGCATGAACT CTCAGGCGGT
GAGCGGCAAC GTGTGATGAT TGCCATGGCG CTAATCAATG AACCCGAGCT ACTGATTGCC
GATGAACCTA CCACAGCATT AGATGTTTCG GTACAAGCAC AGATTTTGGA TTTACTTAAA
TCTCTGCAAC AAGAATTGGG CATGGCGATG TTGTTCATTA CCCATGATTT GAGCATAGTG
CGCCGAATTG CTGACCGAGT GGCAGTGATG CAAAGTGGCC AATTGGTCGA AACTAACGCG
TGCCACACTT TGTTTGCTGC GCCTGCACAT CCCTATACCC AGCAGTTGAT CAATGCCGAT
CCGCGTGGTG TGCCCGTCCC TACAGCGATG GATGCTCCGA CGCTGCTGCA AGCGGAAAAG
TTACGGGTGT GGTTTCCAAT CAAAGGCGGT TATTTTCGCC GCACTCAAGC CTATATAAAA
GCGGTTACAG ATATGAGTTT CACCTTGGCC AAAGGGCAAT CGTTGGGTTT GGTGGGGGAA
AGTGGTTCAG GGAAATCGAC CACGGGCATG GCGATTCTCA AGCTTCTCGC CTCACAAGGG
GCTATCCGTT TTGCAGGGCA AGATCTGCAA GCTCTCAAAC GCCGTGAAAT GCTGCCGTAT
CGCAGTAAAA TGCAGGTGGT GTTTCAAGAC CCATATTCTG CGCTTAATCC TCGAATGTCG
GTGGCGCAAG TGATAGGCGA GGGTTTACGC GTGCATAGCC AGCTTAATGA TGACGAGATT
GATCACGCGA TTTGCGCGGT GATGCAGGAA GTCGGCCTAG ATGTAGACAC TCGGCATCGC
TATCCCAATG AATTTTCTGG TGGTCAACGG CAGCGTATCG CGATTGCGCG TGCGTTGGTG
CTCAAGCCTG AGTTCATATT GCTTGATGAG CCAACCTCAT CGCTAGACCG AACTGTACAA
GCGCAAGTAC TGGATTTGCT GAAAGATTTG CAGCAGAAAT ACCAATTAAC CTATCTGTTT
ATTAGCCATG ATCTCGCGGT GATCCGCGCT TTATGTCACC ACACCATAGT GATGAAAGCG
GGGGAGATTG TCGAACATGG CGAAACTCAA AGCCTATTTG AGAATCCAAG TCACCCGTAT
ACGCAGCAGC TAGTGCGTCT TTCTCTGTTG TAA
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| Protein sequence | MNDWVLKIDN LSVGFGIAGQ ARPVTEGVSL TIARGETLAL VGESGSGKSV TANAILRLLP
KGSAHYLSGS IHFGDVDTLR CSERALRGIR GGRIGMIFQE PMVSLNPLHK IGKQLVETLA
IHRGLRATAA EQKAIEWLGK VGIRHPEIKI NAYPHELSGG ERQRVMIAMA LINEPELLIA
DEPTTALDVS VQAQILDLLK SLQQELGMAM LFITHDLSIV RRIADRVAVM QSGQLVETNA
CHTLFAAPAH PYTQQLINAD PRGVPVPTAM DAPTLLQAEK LRVWFPIKGG YFRRTQAYIK
AVTDMSFTLA KGQSLGLVGE SGSGKSTTGM AILKLLASQG AIRFAGQDLQ ALKRREMLPY
RSKMQVVFQD PYSALNPRMS VAQVIGEGLR VHSQLNDDEI DHAICAVMQE VGLDVDTRHR
YPNEFSGGQR QRIAIARALV LKPEFILLDE PTSSLDRTVQ AQVLDLLKDL QQKYQLTYLF
ISHDLAVIRA LCHHTIVMKA GEIVEHGETQ SLFENPSHPY TQQLVRLSLL
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