| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0523 |
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| Symbol | |
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| ID | 5134058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 580056 |
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| End bp | 580643 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640530846 |
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| Product | hypothetical protein |
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| Protein accession | YP_001215363 |
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| Protein GI | 147671728 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
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| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCGTTTA TATTAGCACC ATACATTCAT AATGTTATCC CCTCATCTTT ACTTTCGCAG
ACTTGGTGCA CGACTTTGTG TTCGCTGGAT GGAGTCGTTA CAATGAGCCA CTTTTACTCG
TTCAGGACTC AAGCGATGTC GATTTGGAAT AAGCCCATCA GTTTAGAAAC ACTCAATGCC
ACATCGAAAA ATACGTTAAT TGAACATTTA AATATCATTT ACACCGAAGT GACAGAAAAT
AGCATTTCCG CCACTATGCC GGTGTGCCAT TTCACACATC AACCACTTGG CATGTTGCAT
GGTGGCGCTT CGGTGGTGCT CGCGGAAACC TTAGGTTCAG TAGCGGCCAA TTTCAGTGTG
GGTGAAGACG CTTACTGTGT GGGCTTGGAT ATCAATGCTA ACCATGTCCG TGCGATGCGT
GAAGGTTTAG TGACGGGTAC TGCAGTACCG TTGCACATCG GGGTATCGAC TCAAGTGTGG
CAAATTGAGA TCAAAGATGA ACAAGGACGA CTGGTTTGTA TTAGCCGTTT GACGGTCGCG
GTGAAACGTT CACGCCCAAA GCAAGCCAAA CCAGTAGCCG AGGTTTAA
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| Protein sequence | MAFILAPYIH NVIPSSLLSQ TWCTTLCSLD GVVTMSHFYS FRTQAMSIWN KPISLETLNA
TSKNTLIEHL NIIYTEVTEN SISATMPVCH FTHQPLGMLH GGASVVLAET LGSVAANFSV
GEDAYCVGLD INANHVRAMR EGLVTGTAVP LHIGVSTQVW QIEIKDEQGR LVCISRLTVA
VKRSRPKQAK PVAEV
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