| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0521 |
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| Symbol | |
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| ID | 5134005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 578044 |
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| End bp | 579741 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640530843 |
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| Product | hypothetical protein |
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| Protein accession | YP_001215360 |
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| Protein GI | 147671880 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4533] ABC-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGCC CGCGTTTACG TGTACAGTTC GAAACACTCT TTGAGCATTT TCAAGGTCAA
GACGTTGAAA CCCAACTGGA AGATGTCACC GATATTCTTT TTTGCACTCG ACGTAATGCG
CGTATTGTTC TCAATAAAAT GGAAGAAGAG GGGTGGATTG AGTGGCATCC TGCGGCTGGG
CGCGGCAAAC TCTCGCAACT GCTCTTTAAA CGCAGTCGCG CGGATGTCAG TGAGAACCTT
GCGCGCCGTT ATCTCAATGA AGGAAAGATA GGCCAAGCGT TTGCCGTGCT TGATCAGGAC
GCCGCAAAAT TAACTCAAGT GATAGAAAGC TATCTTGGCG TTCAGCATCA AGAAGGTCTG
CAAGTTGTCA GGTTGCCGTA CTATCGTCAG CTATCGATGT TGAACCCACA AAAGCCGATG
CGCCGCTCTG AACAGCATAT TGCGCGACAG GTGTTTAGCG GACTTACGCG TCTTGATGAA
GAAGAGCAAT TACAGCCTGA TTTAGCACAC GCTTGGCAGG CGCTATCAGA TACTCACTGG
CGGTTTTACT TACGCCCCGG AGTGCGCTTT CATAATGGCA ATCTCCTCAC CACCGAACTG
ATTGTGCAAA ATCTTTGGCA GCTACGGTTG CTTAATCTTT TTGCCCATAT TGACCGAGTT
GACTCACCTT ACCCTTGGGC GGTCGATGTG CATCTACAAA AGCCCGATAC CCGCTTACCG
CTGTTGCTTG CCGAAGCCTG TGCCAAAATC CTCCCTGCGG AGTCCGATCG CAATCCCGAT
TTTGATTTAA TGCCAGTAGG AACGGGGCCC TACAAAGTGG TTCTAAACGA TGAAAAACGT
TTGGTTTTGC AAGCGTTTGA TGGCTACTTT GGTTTTCGTC CACTGCTGGA CCGAGTTGAA
GTTTGGGTGA TTGATGAAGT GCACTCTTCG ATGGTTTTTC CAAGCTTATC CAATCCGATG
AAAACCGCTC GAGGATCATC AACCGAAGAG GTAGAGCTGG ATCCCGGCTG CACCTATTTA
CTGCTTAATC GTCGTAATGG CGTTGCCAAA GATGAACATT GGGCGCGCTA TCTCACTGAT
AAACTTAATG CGCTCAACCT GTTTCGTCTT CTGCCGGAAG AGAAAATCAT TGAACTTGGG
GTGTTGCCAG CCTATGGGTT AAAACCCGGG TGGTATCACC ACTCAGCGGC AGCGCAAAAA
ACGTTACCGC CAGAATCCAA AGAACTTACG ATTGCCTATC ACGCTCAGCA TCCTATGTTT
CCGACTGTTG CTAATGCGAT TAAACAATTG CTCAGCCAAG ATGGGATCAC AGTCAATGTC
ATCAAATATG AACACACGGT CGTTGAAACT GAAAATGTGG ATATTTGGAT TAAGCCAATG
GGTATTGCTA ATCACCGTGA TGATGCGTTA GCGGGGTGGT TACTCAATTA CTCCGATATT
GAGTTTTTGA GCAAAGGAGA GGATTTCAAT CAGTGGGTGA GTTTGATTGA TGCTTGGCGT
GCTGACTCTT CTGCGCTCTT CCCTGCGAAA GAACTGGGGA AATCACTGGT GGAAAAACAC
CAACTGATCC CAATGTTCCA CTGCTGGTTA GGTATCAGTA AAGATCAGTG TGGTGCATTA
CAAAATGCGA AATGCAATGC GCTAGGTTGG TTCGATTTTA GCCAAGTCTG GGTAAAGCCC
GACTTGTCAG AACACTAG
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| Protein sequence | MSSPRLRVQF ETLFEHFQGQ DVETQLEDVT DILFCTRRNA RIVLNKMEEE GWIEWHPAAG
RGKLSQLLFK RSRADVSENL ARRYLNEGKI GQAFAVLDQD AAKLTQVIES YLGVQHQEGL
QVVRLPYYRQ LSMLNPQKPM RRSEQHIARQ VFSGLTRLDE EEQLQPDLAH AWQALSDTHW
RFYLRPGVRF HNGNLLTTEL IVQNLWQLRL LNLFAHIDRV DSPYPWAVDV HLQKPDTRLP
LLLAEACAKI LPAESDRNPD FDLMPVGTGP YKVVLNDEKR LVLQAFDGYF GFRPLLDRVE
VWVIDEVHSS MVFPSLSNPM KTARGSSTEE VELDPGCTYL LLNRRNGVAK DEHWARYLTD
KLNALNLFRL LPEEKIIELG VLPAYGLKPG WYHHSAAAQK TLPPESKELT IAYHAQHPMF
PTVANAIKQL LSQDGITVNV IKYEHTVVET ENVDIWIKPM GIANHRDDAL AGWLLNYSDI
EFLSKGEDFN QWVSLIDAWR ADSSALFPAK ELGKSLVEKH QLIPMFHCWL GISKDQCGAL
QNAKCNALGW FDFSQVWVKP DLSEH
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