| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0518 |
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| Symbol | |
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| ID | 5134454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 573485 |
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| End bp | 574372 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640530840 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001215357 |
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| Protein GI | 147671936 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.29025 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTAAGTC CAATCACTCT TGAAGCGCTG CATATTTTGG ATGCAATTGA GCGTAGAGGC
AGCTTTGCAG CCGCAGCTAA TGAGCTTAAT CGAGCACCGA GTTCATTGAG CTATCAAATC
CAAAAGCTTG AACAGGATTT GGATTTGATG ATCTTTGATC GCTCCGGTCA TCGAGCCAAT
TTTACTGAAG CGGGCAAACT TATCTTAGAG CGGGGCAGGG CCATCTTGGC TGCGACCGAA
AAATTGGTCA ATGATGCTAC GTTACTGGCT AATGGCTGGG AGCTCGATAT CACGATTGCA
CTGGATGGCA TTGTGCCCGC AGCGAATCTT TTTCCTATGG TTGAAGCACT GGGTAACATC
AGTAAAACGC GAGTGCGCAT TCAAGATGAA ATTTTGGCGG GTTGCTGGGA AGCCTTAGCG
ACGGGGCGTG CGGATTTGTT GATCTGCCCG CGCATCGAAG CCTTACCACA GGATGTGAAA
GCAGAAACCA TTGGCACGAT GAAAATGATC TGGGTTGCCG CGCCGACACA CTATGTGCAT
CGTCGTTCGG GGGAGTTTAA TGAAGAGGCC AGAGAAAAGT ATCGTGCTAT TGCCATTGCC
GATACGGCTC GTGAACAGCC AGCAATGAGT GTAAACATTC TGCAGCGTCA ACCTCGCTTA
ACGGTCAGTA ATTTGGACGC AAAATGCAAA GCGTTAGTGG CGGGCTTAGG GATTGGTACT
CTGCCATTGC AAGTGGCTCA ACCTTATATT GATAAAGGTG AACTAAAAGC TATTCATGGT
TCTGAAGATC TAGAGATGGA TATCGTACTT GCCTGGCGAC GTAACCAGAT GGGTGAAGCC
AAATCTTGGT GTATTCAATA CCTGAAGAAG AATTGGCGCT GGGAGTAG
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| Protein sequence | MLSPITLEAL HILDAIERRG SFAAAANELN RAPSSLSYQI QKLEQDLDLM IFDRSGHRAN
FTEAGKLILE RGRAILAATE KLVNDATLLA NGWELDITIA LDGIVPAANL FPMVEALGNI
SKTRVRIQDE ILAGCWEALA TGRADLLICP RIEALPQDVK AETIGTMKMI WVAAPTHYVH
RRSGEFNEEA REKYRAIAIA DTAREQPAMS VNILQRQPRL TVSNLDAKCK ALVAGLGIGT
LPLQVAQPYI DKGELKAIHG SEDLEMDIVL AWRRNQMGEA KSWCIQYLKK NWRWE
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