Gene VC0395_0513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0513 
Symbol 
ID5134232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp567932 
End bp568312 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content42% 
IMG OID640530835 
Producttranslation initiation factor Sui1 
Protein accessionYP_001215352 
Protein GI147671446 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0023] Translation initiation factor 1 (eIF-1/SUI1) and related proteins 
TIGRFAM ID[TIGR01158] translation initation factor SUI1, putative, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.435578 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGCTTA CCTCGTTGCA AGACAACGAG CGATGCAACA ACAAGCGCAA CAAAAAAGAT 
AGTAAAAGTA TGACATTGGT GTATTCAACC GAAGTCGGGC GCATTAAGCC TGAGCATGAA
AAAATAGAGC GTCCAAAAGG CGATGGTATT GTCCGCATTT TCCGTGAAAC TAAAGGCCGT
AAAGGAAAAG GTGTCACTAT TGTAAAAGGT TTAGACCTTG ACGATGCCGC TCTAAAGCTG
CTTGCCGCTG AACTCAAGAA AAAATGTGGA TGTGGTGGAG CTGTAAAAGA TGGCGATATT
GAAATTCAAG GAGATGTTAG AGATCAACTC AAAACATTGC TTGAATCGAA AGGACACAAA
GTCAAATTAG CAGGTGGTTA A
 
Protein sequence
MKLTSLQDNE RCNNKRNKKD SKSMTLVYST EVGRIKPEHE KIERPKGDGI VRIFRETKGR 
KGKGVTIVKG LDLDDAALKL LAAELKKKCG CGGAVKDGDI EIQGDVRDQL KTLLESKGHK
VKLAGG