| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0499 |
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| Symbol | |
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| ID | 5134744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 555835 |
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| End bp | 557334 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640530821 |
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| Product | sensor histidine kinase |
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| Protein accession | YP_001215338 |
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| Protein GI | 147671658 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000000013599 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTATA GTTTTTGCAT GTTAGAAAAA ACCAATATTC CCTTGATAAG AGCGCTTAAT
CTCACCTTGG TAAGCTTATG TTTTGCCATG TTACCGAATC CAGTTCACGC CGATTCGCTT
CCTGAGCGCA TCGACTTGTT TGTTTCGCTC TTTGATTATA ATTCTGCGAC GACGTCTTAC
GATATCCGAT CGATTCAAAC CGATTTCCCC ACGCGCTTAT TAACACCAGA TAGCATGTTG
CCGCAAACGT CTGAATATCC GCTTAAAGAT ATTCAACTGC TTTATAAATT GGCACAAAGT
TGTACAGGCA AGTTGCCGTT AAGCCCATTG ATCACTGAAC CTTTGGTGTT TACTCGTTCA
CTCTGCAAAG GCTCCAGCTT GTCACCACGC TGGTTTGCCC GCAGTGGTTT GATTCATCCT
GGCGGTGGAA CTTACGCATT TCGCTATGCG GAAAAATACC CAGCCCAGTT TGCGAACTTG
CTGCCTTACA TGCACATCCA AGAGCGTCCC AATGCCGCAG AGGGAACCTT ACTGTACCAC
TTACAAAATA TGGGTGAAGA TGCGATCAAT GCTTTGGTGT CTGGTGCATC CATGTTTGGC
TCCGGTAGTG ATTTATGGTT AAGAAAAGGG GATATCTACT ACCTTTTTAA TGAAGAAACG
TGGTTAACCA ATGCCAATAA AGCTGGGTTA AGCTATAGCT TGCTATCAGC AGATAACACC
TGCTTTATTC AGCGTGGCAA CATCTGTTGG GATGTGGAAG ATCATTCAGA TCTTTTACGA
ACTAGCATGA TCATTCTTGT TATTGCCAAT ATCTTCCTTG TGCTTGGTTG GTCTGGGTAT
CGTTGGAATT CAAAACGACA AGAAATGCGC AGTCGGATGC TCATTTTGCA AATTCTCACC
CATGAGCTGC GAACCCCAAT CGCGAGCTTG TCACTCACCG TTGAAGGCTT TCGACGTGAG
TTTGAGCATT TGCCCGAATC TCTGTACGAT GAGTTTCGTC GATTGTGTGA AGATTCCCGA
CGATTGCGCC AACTCGCCGA AGCGAGTAAA GACTATTTGC AGTCTGACAG TAAACCACTC
GCGTCAGATT GGGTTCCTTC GGTGGAGGAG TGGCTACAAT ATAAAGTCGA AGAAGAATTT
AGTGGTAATG TGACTCTGAA ACTTAATCAA GATATCGCTG CCAAACTCAA TGTTTATTGG
CTAGGAACTT GTGTGGATAA TTTATTGCGT AACGCTGTCA AATACGGCGT TGCACCTGTC
ACTCTCGAAG TGATAACACA AACTAACTTA GTCACTTTCA AAGTGACCGA CCAAGGCTCG
TTGACTCACC GTGATTGGCG TCATTTACGC AAACCATTTG TGAGCAAAAG CGGCTTAGGC
CTTGGATTGA CCATTGTCGA ATCAATGGTG GGACGAATGG GCGGAAAAAT GTCACTCGAA
GGCCCACCGA CAACTTTTAT TTTGGAGATA CCTTGTGAAA CAGACACTGC TTCTCGTTGA
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| Protein sequence | MRYSFCMLEK TNIPLIRALN LTLVSLCFAM LPNPVHADSL PERIDLFVSL FDYNSATTSY
DIRSIQTDFP TRLLTPDSML PQTSEYPLKD IQLLYKLAQS CTGKLPLSPL ITEPLVFTRS
LCKGSSLSPR WFARSGLIHP GGGTYAFRYA EKYPAQFANL LPYMHIQERP NAAEGTLLYH
LQNMGEDAIN ALVSGASMFG SGSDLWLRKG DIYYLFNEET WLTNANKAGL SYSLLSADNT
CFIQRGNICW DVEDHSDLLR TSMIILVIAN IFLVLGWSGY RWNSKRQEMR SRMLILQILT
HELRTPIASL SLTVEGFRRE FEHLPESLYD EFRRLCEDSR RLRQLAEASK DYLQSDSKPL
ASDWVPSVEE WLQYKVEEEF SGNVTLKLNQ DIAAKLNVYW LGTCVDNLLR NAVKYGVAPV
TLEVITQTNL VTFKVTDQGS LTHRDWRHLR KPFVSKSGLG LGLTIVESMV GRMGGKMSLE
GPPTTFILEI PCETDTASR
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