| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0477 |
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| Symbol | |
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| ID | 5134486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 532661 |
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| End bp | 534292 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640530800 |
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| Product | hypothetical protein |
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| Protein accession | YP_001215318 |
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| Protein GI | 147671695 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000000000481423 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATTTAG AGCGAATTGA AATCGCTGGT TTCCGTGGCA TCCGCCGACT ATCACTGACC
TTTGATGAAA TCACCACACT GATTGGAGAA AACACTTGGG GTAAATCGTC TTTGCTGGAT
GCCCTATCGG TAGTATTGCC TGCGGATGGC ACTCTGTACC CATTCACCCT GCAAGATTTC
CACGTTGATT ACTCTATTGC TGATGCGCAG ACGCAAAATT TGCAGATCAT CCTTGTTTTC
GCCGCCAGCG ACCTCCATGA GCCCAAGGCT GGGCGCTATC GTAAACTCAA ACCACTTTGG
CAAACCGATG AACAAGGGGC GCAAAAAATC ATTTATCGGA TCAGCGCCTC AAGGGTCAAA
TATGACATCA GCACTCAATA CGCTTTTCTA GATTTAGAGG GCAACTCACT CACTCTTCAT
CACTCAGAAA AATTGGCGCA AGAGTTGATG AGTTTACATC CAGTGATCCG CTTAAAAGAT
TCTCGACGTT TTGAAAAATC GCTCGCCAAT GGTAACGGCA AGAATGCTCG TGTCGAGAAA
CGGATCAGCA ATACGTGGCG ACGTTTAATG GCGACGCCCG GACACGTTAA CAAAGGCGAG
ATCCGCAGCA GTTTGAGTGC AATGAACTCT CTGGTTGAGC ACTACTTTTC GTTCAAAAGT
CAAAGCCGGA AAAATCCGCG CCGCGAACGC GACAGCTTAC TGTATGCGGC CTCTCCGAGT
GAAAAAAGCC TCAGCCAAAT CATTCATGAA ACCAAAAATA AACAGACTAA GCTGCTACTT
CTTGGTTTAC TCAACGCGTA TTTACAAGGC AAAGGACCCA AAGAGCTGCG CCGCTGCGCT
CGGCCGATTT TGATCATTGA AGATCCGGAA GGTCGTTTAC ACCCTACACA CCTTGCCCGA
GCTTGGAGCT TTTTAGATTT GCTCCCCATG CAGAAAATTC TCACCACCAA CAGCAGTGAT
TTACTGGGGG CGGTGCCTTT GCATTCGATT CGTCGTTTGG TGAGAAAATC CGATCGCACC
ATTGCGACCT CCGTTTCGCA ACGCAGTTTA AGTCGAGATG AGTTGCGCCG CATTGGTTTC
CATATCCGCT TTCACCGCTC GGGAGCGCTC TTTGCTCGCT GCTGGCTGCT GGTTGAAGGT
GAAACGGAAG TGTGGCTATT TAACGAACTC GCCCATCAAT GCGGATACAA CTTAGCTGCA
GAAGGTGTGC ATATCATCGA ATTTGCTCAA TCAGGGCTAA AATCCTTAAT CAAGGTTGCA
CGTGCGTTTG GTATTGACTG GCATGTGGTG ACCGATGGCG ATCCTGCGGG GAAAAAATAC
TCGGCGACCG TACGAGGATT ACTGGGACAT GATCAAGAGC GACATCGCTT AACCGAATTG
CCCGATCGAG ACATTGAGCA CTTCCTTTAC TCGCACGGCT TTGAATACTT CTTCAAAGAG
CTGGTTAAAA TTCCTCATGA CCACCCGATC CCCGCCAAAA AAGTGGTCTC TAAAGTTCTG
AAAAAACACG CGAAACCGGA TTTGGCTTTG GCGATCGTTT CACATTGTGA AAGCAATGGA
ACAGAGTGTA TTCCTGTACT CCTGCGCTGG ACGTTAAAAC GAGTCATCAC AATGGCAAAC
GGCAATACCT AG
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| Protein sequence | MHLERIEIAG FRGIRRLSLT FDEITTLIGE NTWGKSSLLD ALSVVLPADG TLYPFTLQDF
HVDYSIADAQ TQNLQIILVF AASDLHEPKA GRYRKLKPLW QTDEQGAQKI IYRISASRVK
YDISTQYAFL DLEGNSLTLH HSEKLAQELM SLHPVIRLKD SRRFEKSLAN GNGKNARVEK
RISNTWRRLM ATPGHVNKGE IRSSLSAMNS LVEHYFSFKS QSRKNPRRER DSLLYAASPS
EKSLSQIIHE TKNKQTKLLL LGLLNAYLQG KGPKELRRCA RPILIIEDPE GRLHPTHLAR
AWSFLDLLPM QKILTTNSSD LLGAVPLHSI RRLVRKSDRT IATSVSQRSL SRDELRRIGF
HIRFHRSGAL FARCWLLVEG ETEVWLFNEL AHQCGYNLAA EGVHIIEFAQ SGLKSLIKVA
RAFGIDWHVV TDGDPAGKKY SATVRGLLGH DQERHRLTEL PDRDIEHFLY SHGFEYFFKE
LVKIPHDHPI PAKKVVSKVL KKHAKPDLAL AIVSHCESNG TECIPVLLRW TLKRVITMAN
GNT
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