| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0427 |
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| Symbol | |
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| ID | 5134125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 472796 |
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| End bp | 473632 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640530750 |
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| Product | ABC transporter, periplasmic substrate-binding protein |
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| Protein accession | YP_001215268 |
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| Protein GI | 147671522 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0226] ABC-type phosphate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02136] phosphate binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00000000177912 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAGGA TGGCACTTGC CGCCGTTTGC GCACTTCTTT TTTCCATCAC AACGATGACA
CCCTTTGTGC AAGCAAGTGA AATAACCATT TCAGGTTCCA CCTCAGTGGC CAGAATTATG
GACGTACTGG CTGAAAAATA TAACCAACAA CACCCCGAGA CTTATGTCGC AGTTCAAGGT
GTCGGTTCTA CCGCTGGGAT TTCTCTTTTG AAAAAAGGCG TCGCGGATAT CGCTATGACC
TCACGCTATC TCACGGAAAG TGAAGCGCAA AACACCCTAC ACACTTTTAC GCTGGCTTTT
GATGGTTTAG CGATTGTGGT CAACCAAGCC AATCCAGTCA CCAATCTTAC GCGAGAGCAG
CTATACGGCA TTTACAAAGG CCAAATCACC AACTGGAAAC AGGTGGGCGG TAACGATCAA
AAAATCGCGG TCGTGACTCG CGAAGCCTCA TCGGGTACTC GCTACAGCTT TGAAAGCTTG
ATGGGATTAA CCAAAACCGT CAAAGATCGT GAGGTTTCCG ATGTTGCGCC GACCGCGCTT
GTCGTCAATA GCAACAGCAT GATGAAAACG TTAGTCAACC ACAATACTCA AGCGGTTGGC
TTTATCTCTA TTGGCTCGGT CGATAAATCC GTCAAAGCGA TTCAGTTTGA AAAAACAGAT
CCCACTTCTG ACAACATAGC TAAGCACACT TACCAATTAT CACGCCCGTT CTTAATTTTG
CACTACTCAG ATAACGCAGA CGAACAGACC AAAGAGTTCA TCGCCTTCTT AAAGTCTGAA
AGCGCTAAAA AATTGATTGT GGAATACGGC TACATTATGC CAAGTGATGT GGAATAA
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| Protein sequence | MIRMALAAVC ALLFSITTMT PFVQASEITI SGSTSVARIM DVLAEKYNQQ HPETYVAVQG
VGSTAGISLL KKGVADIAMT SRYLTESEAQ NTLHTFTLAF DGLAIVVNQA NPVTNLTREQ
LYGIYKGQIT NWKQVGGNDQ KIAVVTREAS SGTRYSFESL MGLTKTVKDR EVSDVAPTAL
VVNSNSMMKT LVNHNTQAVG FISIGSVDKS VKAIQFEKTD PTSDNIAKHT YQLSRPFLIL
HYSDNADEQT KEFIAFLKSE SAKKLIVEYG YIMPSDVE
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