Gene VC0395_0426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0426 
Symbol 
ID5134241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand+ 
Start bp471958 
End bp472650 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content47% 
IMG OID640530749 
ProductMaoC domain-containing protein 
Protein accessionYP_001215267 
Protein GI147671923 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.00000000000000106685 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGTTAAGA ATGAGGTTTT GATGAGAGTC GCTGAGCTTC TGAAGCATCG AGCTGAAAAC 
TTGGTTAAGC ACACTGAATT TAAGCAGTGG ATGTCTCCGT CTGTGCGCGA GTACTGGGAT 
GATATTTTAA ACAAGACCCA AAGCCGTCCA CTGTTTGGGT GGGTAAAAGA TCTGCATCTG 
CCTGCCAATG AAGATACGCC GATCCCTGAG CCGATTGAAC TCAAACCCGA GGCTCAAGCA 
CTGTATGACG AGTTGCAAAC CCAGGTGGGT GAAGTGATCC ATACGGGAGA TTGGTTACTG 
GTTGATCAAG AGCGAATCAA TCAATTCGGT GCAGTCACTG AAGATATGCA GTGGATTCAT 
ACCAATCCGG ATCGTGCGGC GTTGGAATCG CCATTCAAAA CGACGATTGC GCATGGATTT 
TTAACGCTGG CATTGTTGCC AAAGTTAACC GACAGCGTTG ATGAAGAGAA AACCTTGTTT 
CCAACCGCTA AAATGGTGGT CAATATTGGC TTGAACTCGG TACGTTTCCC TTATCCAGTA 
AAAGCGGGTA ATCGAGTTCG TGCCGTGAGT ACTTTGTCGA AAGTGACCCC GATTAAGAAG 
GGACTTGAGA TTGAGCGTGA AATCAAGGTT GAGATCGAGG GCGTTCGTCG TCCGGGTTGT 
GTTGTAGTGT CAGTGATCCA ACTGCACTTC TAG
 
Protein sequence
MVKNEVLMRV AELLKHRAEN LVKHTEFKQW MSPSVREYWD DILNKTQSRP LFGWVKDLHL 
PANEDTPIPE PIELKPEAQA LYDELQTQVG EVIHTGDWLL VDQERINQFG AVTEDMQWIH 
TNPDRAALES PFKTTIAHGF LTLALLPKLT DSVDEEKTLF PTAKMVVNIG LNSVRFPYPV 
KAGNRVRAVS TLSKVTPIKK GLEIEREIKV EIEGVRRPGC VVVSVIQLHF