| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0420 |
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| Symbol | speB |
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| ID | 5134567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 463768 |
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| End bp | 464697 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640530743 |
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| Product | agmatinase |
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| Protein accession | YP_001215261 |
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| Protein GI | 147671742 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0010] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family |
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| TIGRFAM ID | [TIGR01230] agmatinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.00981885 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATGATT TGTTTACTAA AACTGATTAT TCACTCTACT CAAACGCGAT GACGTTTGTC
CGTCGTCCCT ATGTGCGTAA CCCAGTAGAT ACTAATGCTG ATGTCGTGGT ACTTGGCGTG
CCTTTGGATA TGGCGACGTC CGGTCGTCCG GGGGCTCGTA TGGGGCCTGA CGCGATTCGT
CGTGCTTCGG TTAACCTCGC TTGGGAAGGT AAGAAATTCC CTTGGGATTT CAACCTGTTT
AAAAAGATCA ACGTGATTGA TGCGGGCGAT TTGGTTTTTG ATTGCGGTGA TGCTGAAGAT
TTCACTTACC GCCTAGAAGC CGCGACCAGC GAAATCCTGA AAAGTGGCAA AACCATGCTG
GCACTGGGTG GCGATCACTT CATCACTCTG CCAATCCTGC GTGCTTACGC TAAGCACTTC
GGTGAAATGG CGCTGATCCA CTTTGATGCA CACACGGACA CTTACGCGAA CGGCAGTGCG
TATGACCACG GCACCATGTT CTACCATGCG CCAAAAGAAG GTCTGATCTC GGCTAAGCAT
TCGGTGCAAG TGGGTATTCG TACGGAATAC AAACAAGAAG GCCACGGCTT CAACGTGATT
AACGCGATGC AAGCCAACGA CATGTCTGTC GAAGAGATTG TGGCGCAAAT TCGCCACATC
GTGGGTGACA AGCCGGTTTA CCTGACTTTC GACATTGACT GTCTGGATCC TGCTTTCGCA
CCGGGTACGG GTACGCCAGT TTGTGGCGGT TTGAGCTCAG ACAAGATCCT GAAAATCATC
CGCGCGCTGA AAGGCATCAA CCTGATCGGT ATGGATGTGG TAGAAGTGTC ACCTCCTTAC
GATCAAAGCG ACCTGACTTC ACTGGCGGGT GCGACGATCG CTCTGGAACT GCTCTACGTT
TGGGCATCCA ACAAGAAAGA TGAAGAGTAA
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| Protein sequence | MNDLFTKTDY SLYSNAMTFV RRPYVRNPVD TNADVVVLGV PLDMATSGRP GARMGPDAIR
RASVNLAWEG KKFPWDFNLF KKINVIDAGD LVFDCGDAED FTYRLEAATS EILKSGKTML
ALGGDHFITL PILRAYAKHF GEMALIHFDA HTDTYANGSA YDHGTMFYHA PKEGLISAKH
SVQVGIRTEY KQEGHGFNVI NAMQANDMSV EEIVAQIRHI VGDKPVYLTF DIDCLDPAFA
PGTGTPVCGG LSSDKILKII RALKGINLIG MDVVEVSPPY DQSDLTSLAG ATIALELLYV
WASNKKDEE
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