Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0390 |
Symbol | |
ID | 5134855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | - |
Start bp | 435243 |
End bp | 436565 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640530713 |
Product | inner membrane protein YjeH |
Protein accession | YP_001215231 |
Protein GI | 147671838 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGTGAAT GTTTATTCAG TGAAAGACCT TATGGAATGG AGTATGCTAA AGCTCAAATT CTGTGCAGGT GGCGTAAAGT GAATCAACTG AAAAAGGATA TTTCTCTGGG AGCAGGAATT GCTCAACTTT CCACGACGTT AATGGGGACC GGGCTGTTTA TGGTTCCAGC GATTGCCGCA GGGATCGCCG GTGTATTCTC ACTCTGGGCA TGGCTGCTGC TGTTTGTTGC GATTTGCCCG ATCGCCTTGA CCTTTGCGCA ATTAGGTAAA CGTTACCCCA ATGCGGGGGG CACCGCTTAC TTTGTACGCC AAGCATTTAA TCCACGCCTT GAACGTGCAG TGGCATGGTT GTTTCTCAGC GTTATTCCTG TGGGCGTTCC TGCGGCAGTC ACGCTCGCCG CCAGTTTTCT GCAAGCCTTA CTCCCAGCGC CTTTGGCTAA CCCACTGCTG ACCCAAACTC TAACTATATT GCTCTTAGTT GGGGTTAATT TGGCGGGTAC TAAGTCATCA GGCCGTTTAC AAACCCTCAT CGCGTTGGCC ATTTTCAGTT TGGTGATTGC TTTTTGGTGG CGTGGTGAAG TAACCACGCA AGATTTGGTC ATGCCTGCAT TAACACAGGA AGGATGGGTT TCGATCGGAG CCGCGCTGGC AGTCATGTTC TGGTGTTTTG TCGGCATTGA GGCTTTTGCC CATATGGGAG AAGAGTTTCG TAATCCGCAA CGCGATTTTC CATTGGCGAT TTTGATCGGC AGTTTTGTCG CTGGATTGAC CTACTGGGCG TGTTCCGTCG TCGTACTGAA ATTTGGTGCC TTTGGCACTC CTCAATTTGA TAGTGGCGCG ATTCCTTGGC TCAGTGACCA ATTGTTTGGC ACTCGCTGGG CAATCATGAT CAGTGTGATT GGCTTTTTAG CCTGTTTTGC CAGTCTGAAC CTTTACACCC AAAGCTTAGC GCGCATGGTG TGGGCACAAG CACGAGAATA TCGTCCTGAA AGTGCGATCG CTCGCGTCTC GATTCGGGGG GTTCCTGCAC ACGCAACGTT ACTCGTCGGA GTGGTACTGT TTGCTTCTTG CTTTATTGGC CATTTGACTG GGCTTGATCT CGAATTCTTC CTCAAGCTGG CGAATGGTAT CTTTGTCTTG GTTTACTTAT TGGCGATGTT AGCCGCATTC AAACTTCTGA CGGGGTGGAG TAAACACCTT GCTGGCTTAG CTTTGGTTCT GTGTGCTGGA GTGTTTCTCT GTTTAGGGTG GTCAATGCTA TACGCTCTGG GCGTCTTTGT GCTACTGATT CGGCCATGGC AAGCTCGGGT GCAAACAATC TAA
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Protein sequence | MSECLFSERP YGMEYAKAQI LCRWRKVNQL KKDISLGAGI AQLSTTLMGT GLFMVPAIAA GIAGVFSLWA WLLLFVAICP IALTFAQLGK RYPNAGGTAY FVRQAFNPRL ERAVAWLFLS VIPVGVPAAV TLAASFLQAL LPAPLANPLL TQTLTILLLV GVNLAGTKSS GRLQTLIALA IFSLVIAFWW RGEVTTQDLV MPALTQEGWV SIGAALAVMF WCFVGIEAFA HMGEEFRNPQ RDFPLAILIG SFVAGLTYWA CSVVVLKFGA FGTPQFDSGA IPWLSDQLFG TRWAIMISVI GFLACFASLN LYTQSLARMV WAQAREYRPE SAIARVSIRG VPAHATLLVG VVLFASCFIG HLTGLDLEFF LKLANGIFVL VYLLAMLAAF KLLTGWSKHL AGLALVLCAG VFLCLGWSML YALGVFVLLI RPWQARVQTI
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