| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0371 |
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| Symbol | hap |
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| ID | 5134128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 405930 |
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| End bp | 407759 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640530694 |
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| Product | hemagglutinin/protease |
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| Protein accession | YP_001215212 |
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| Protein GI | 147671703 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3227] Zinc metalloprotease (elastase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATGA TACAACGTCC TCTGAATTGG TTAGTTCTGG CCGGAGCGGC AACTGGCTTC
CCTCTCTATG CGGCACAAAT GGTCATGATT GATGATGCAT CAATGGTTGA ACAAGCGTTG
GCGCAGCAAC AGTACAGTAT GATGCCTGCC GCCAGCGGTT TTAAAGCCGT CAATACGGTA
CAGTTGCCGA ATGGTAAGGT GAAAGTGCGT TACCAGCAGA TGTACAACGG GGTTCCTGTC
TATGGCACCG CTGTGGTGGC AACCGAATCC AGTAAAGGGA TTTCGCAAGT GTATGGTCAA
ATGGCTCAGC AGTTGGAAGC CGATCTCTCA ACCGTGACCC CTGACATTGA AAGCCAGCAG
GCCATCGCTT TAGCGGTTAG CCATTTTGGT GAACAACACG CTGGAGAATC GCTCCCGGTG
GAAAACGAAA GTGTGCAACT GATGGTACGT TTGGATGATA ACCAACAGGC TCAGTTAGTG
TACTTGGTCG ACTTTTTTGT CGCTTCAGAA ACACCTTCGC GTCCGTTCTA CTTTATCAGT
GCAGCAACGG GAGAAGTGCT AGACCAATGG GATGGCATTA ACCACGCACA GGCAACAGGA
ACCGGCCCCG GCGGTAACCA AAAAACGGGA CGTTATGAAT ACGGCAGTAA CGGTTTACCC
GGTTTCACGA TTGATAAGAC CGGAACCACC TGTACGATGA ATAACAGTGC GGTAAAAACC
GTTAACCTCA ATGGCGGCAC CTCGGGTAGC ACGGCGTTCA GTTATGCTTG TAACAACAGC
ACTAACTACA ACAGTGTTAA AACAGTGAAT GGTGCTTACT CACCGCTAAA CGACGCGCAC
TTCTTCGGAA AAGTGGTGTT TGATATGTAT CAGCAGTGGT TGAATACTTC GCCGCTGACT
TTCCAATTAA CCATGCGTGT GCACTATGGC AATAACTATG AAAATGCCTT CTGGGATGGC
CGCGCCATGA CTTTTGGTGA TGGCTATACC CGTTTCTATC CTTTGGTGGA TATCAACGTT
AGTGCCCATG AGGTCAGCCA CGGTTTTACT GAGCAGAATT CAGGCCTCGT TTACCGAGAT
ATGTCCGGTG GTATTAACGA AGCATTCTCG GATATCGCAG GGGAAGCGGC AGAGTACTTT
ATGCGTGGCA ATGTTGACTG GATTGTCGGC GCGGATATTT TTAAATCCTC CGGTGGCCTA
CGTTATTTCG ATCAGCCGTC ACGTGATGGC CGATCGATAG ATCATGCTTC ACAGTATTAC
AGCGGTATTG ATGTTCACCA TTCGAGTGGC GTGTTTAACC GCGCGTTTTA CCTACTCGCC
AATAAATCGG GTTGGAACGT ACGTAAAGGT TTTGAAGTGT TTGCCGTGGC TAACCAGTTG
TACTGGACAC CGAACAGCAC TTTTGATCAA GGTGGCTGTG GGGTAGTGAA AGCGGCGCAG
GATCTCAACT ACAACACCGC AGACGTCGTG GCAGCCTTTA ATACCGTGGG TGTCAATGCT
TCTTGTGGCA CCACGCCACC ACCTGTCGGC AAAGTGCTTG AGAAAGGTAA ACCGTTCACA
GGACTGAGCG GCTCACGTGG AGGAGAAGAT TTCTATACCT TCACTGTGAC CAATTCAGGC
AGTGTTGTTG TGTCCATCAG TGGTGGAACG GGCGATGCGG ATCTGTATGT CAAAGCAGGC
AGCAAACCCA CCACTTCTTC TTGGGATTGT CGTCCATACC GTTCAGGCAA TGCCGAGCAG
TGTTCCATCT CTGCGGTCGT GGGTACGACA TACCATGTCA TGTTACGCGG TTACAGTAAC
TATTCTGGTG TGACGTTACG CTTGGACTAA
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| Protein sequence | MKMIQRPLNW LVLAGAATGF PLYAAQMVMI DDASMVEQAL AQQQYSMMPA ASGFKAVNTV
QLPNGKVKVR YQQMYNGVPV YGTAVVATES SKGISQVYGQ MAQQLEADLS TVTPDIESQQ
AIALAVSHFG EQHAGESLPV ENESVQLMVR LDDNQQAQLV YLVDFFVASE TPSRPFYFIS
AATGEVLDQW DGINHAQATG TGPGGNQKTG RYEYGSNGLP GFTIDKTGTT CTMNNSAVKT
VNLNGGTSGS TAFSYACNNS TNYNSVKTVN GAYSPLNDAH FFGKVVFDMY QQWLNTSPLT
FQLTMRVHYG NNYENAFWDG RAMTFGDGYT RFYPLVDINV SAHEVSHGFT EQNSGLVYRD
MSGGINEAFS DIAGEAAEYF MRGNVDWIVG ADIFKSSGGL RYFDQPSRDG RSIDHASQYY
SGIDVHHSSG VFNRAFYLLA NKSGWNVRKG FEVFAVANQL YWTPNSTFDQ GGCGVVKAAQ
DLNYNTADVV AAFNTVGVNA SCGTTPPPVG KVLEKGKPFT GLSGSRGGED FYTFTVTNSG
SVVVSISGGT GDADLYVKAG SKPTTSSWDC RPYRSGNAEQ CSISAVVGTT YHVMLRGYSN
YSGVTLRLD
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