| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0367 |
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| Symbol | |
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| ID | 5134817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 401296 |
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| End bp | 402717 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640530690 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001215208 |
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| Protein GI | 147671531 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATGAAGA AATCGCAAGT ACTGGCCAAC ACAATTAAAA GTCAAATCGA GCAGAATATC
TGGCTTAGTG GAGAAAAAAT CCCATCGATT CGATCCACCT GCAAACGATA CAAGCTGAGT
ATTGAAACTG TGCTCCAAGC CTATCAACAG TTGGAAGATC AAGGCTATAT TCGCGCCAAA
GCGAAATCAG GCTATGTCGT GTTACCGCGA AGAAATACTC TATTTGCCGG CAATCTCAGT
GCAAAAGTGA TTAAACCCTA TCCAGTAAAA ATCAGCGATT TACTATACGA CGTCCTACAA
AGAGCAAAAG ACCCCGAGAT CATTCCATTT AGTTCAGCAT TCCCTGACCC TGCGTTATTT
CCACACCAAG CGTTATCACG CAGTTTAGCG AATGCTAGCC GTCAAATGTT GGGAAGCTGC
ATGCTGACTA ATTTACCTCC TGGCAGCCAA ACGCTAAGAC GGCAAATCGC TCAGCGCTAT
CAAAAAAGTG GTTTAAATGT ATTACCCGAT GACATCGTCA TTACTTCAGG GGCAATGGAA
GCGTTGAACT TATGCTTACA ATCTTGCACA AAACCGGGGG ATTTAGTCGC CATCGAATAC
CCCGCTTTTT ATGGTGTTTT GCAAGCGATT GAACGGCTCA ATCTTACGGC GGTTGAGATC
CCAACCGATC CTAGAGATGG CATTGATCTC GATGTGTTAG CCTCTGTATT TTCTTCTATG
GATATTAAAG CATGCTGGTT TATGACCGAG TCACAGAATC CGCTCGGCTA TTCTATGAGT
GAAACAAACA AGCAGCGTTT GGCAGAGTTA GTCAATCACT ATCAAATTCC AATGATTGAA
GATGATGTTT ATCGTGAGCT TGGTATAGGT AACCCAAGCT CACTGCCAGC AAAAGCTTAC
GATAAAGTAG GCAATATCCT GCTATGCGGT TCATTTTCGA AATCTCTATC GCCCGGTTTT
CGTATCGGTT GGGTCGTTGC GGGAGAACGC GCCTTAAACA TCCAACGCTT ACAGCATTTG
TCCACTCTTT CTAGCAGCAT CCCGATCCAG CTCGGCCTAT CTCATTACCT CACTTTTTAT
AACTTTGATC ACCACTTAAA AAAACTGCGT AAATTGCTGA ACGAGCGTAA AAAAGCACAT
GCTGAATTAC TGCGAACCTA CTTGCCACAT AACACTAAAA TCCATCTCAA TAACGGGGGC
TATTTTATCT GGGTCGAACT GCCCCAAACC ATTTACGCAG AAACTCTGTA CGAACAGGCA
CTTGAACACA ATATAGCAAT TGCTCCGGGG ATCTTGTTCA GCAGCGATAA ACGCTTTTCC
CATCATATCC GTCTCAACTG TTCTTATGCA TGTGATGAAC GAATCGAGCA AGCCATTCAA
ACTCTAGGTC AGCTTATTCA CACCATGGAA ATCAATAGGT AA
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| Protein sequence | MMKKSQVLAN TIKSQIEQNI WLSGEKIPSI RSTCKRYKLS IETVLQAYQQ LEDQGYIRAK
AKSGYVVLPR RNTLFAGNLS AKVIKPYPVK ISDLLYDVLQ RAKDPEIIPF SSAFPDPALF
PHQALSRSLA NASRQMLGSC MLTNLPPGSQ TLRRQIAQRY QKSGLNVLPD DIVITSGAME
ALNLCLQSCT KPGDLVAIEY PAFYGVLQAI ERLNLTAVEI PTDPRDGIDL DVLASVFSSM
DIKACWFMTE SQNPLGYSMS ETNKQRLAEL VNHYQIPMIE DDVYRELGIG NPSSLPAKAY
DKVGNILLCG SFSKSLSPGF RIGWVVAGER ALNIQRLQHL STLSSSIPIQ LGLSHYLTFY
NFDHHLKKLR KLLNERKKAH AELLRTYLPH NTKIHLNNGG YFIWVELPQT IYAETLYEQA
LEHNIAIAPG ILFSSDKRFS HHIRLNCSYA CDERIEQAIQ TLGQLIHTME INR
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