| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0327 |
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| Symbol | tonB1 |
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| ID | 5134173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 358668 |
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| End bp | 359417 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640530650 |
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| Product | tonB1 protein |
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| Protein accession | YP_001215168 |
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| Protein GI | 147671825 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000000128507 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAGGGAGA AGGACGTGAA TCTGAACAGA TATGTCATTG CGGGAGGGCT TTCCCTAGCT
TTTCACGCGC TATTGCTTAT CACGACAGAT GAAGCACAGG TGTTTGCCAT GCCTGCTGGA
AACCCAACTC AATCGGTTTC GATCAATATG GTTTCGATGC CTAAAGTCGC ACCCGCTCAA
CCAGAGCAAA CCCAAACAGA ACAATCAAAA CTGGAATCGG TCAAGCCGAC ACCAGTACAA
GAAGTCGTAA AAACTCCGCC TGCTAAGCCG AAGGTGGAGC CGCACAAACC TAAACCTCAA
ACCGTGAAAA AACCCGTACC GGCTGAGCAA GTCCCATCCA AATCGGTAGC GAAGCCGCAA
CCGGAGAAGG TAGAGCGTAC CGCTGAAATG GCACAAAAGC CTGCGCCAAC GCCTAACCAG
CAACCGAGCC AGCCCACGGC GGCTAGCCAA GGCATCACAA GTCAACCTAT TTTGGTGGAT
AAGCCCGCTT TAGTGAGCGC ACAAGTTCAA CCACGTTATC CACGTATTGC TCGTAAGCGC
GGGATCGAAG GCACTGTGAT GTATGAAATT TGGTTGGATG CGCAAGGTAA TCAAATCAAG
CAGCAATTGC TCTCTTCATC CGGCACAGAA GCCCTAGATC AATCGGCGCT CGAAGCCATT
AAACAGTGGA AATTTTCTCC ACATATTCTT GACGGTGTGC CCGTAGCTCA CCGAATTCAT
ATCCCTATTC GTTTTAAATT GGAAGGCTAA
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| Protein sequence | MREKDVNLNR YVIAGGLSLA FHALLLITTD EAQVFAMPAG NPTQSVSINM VSMPKVAPAQ
PEQTQTEQSK LESVKPTPVQ EVVKTPPAKP KVEPHKPKPQ TVKKPVPAEQ VPSKSVAKPQ
PEKVERTAEM AQKPAPTPNQ QPSQPTAASQ GITSQPILVD KPALVSAQVQ PRYPRIARKR
GIEGTVMYEI WLDAQGNQIK QQLLSSSGTE ALDQSALEAI KQWKFSPHIL DGVPVAHRIH
IPIRFKLEG
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