Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0301 |
Symbol | |
ID | 5134133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | - |
Start bp | 334908 |
End bp | 335933 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640530624 |
Product | hypothetical protein |
Protein accession | YP_001215142 |
Protein GI | 147672292 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGTGT CGAGTGCGTT TTTTCAATCT TGTCTTCCTA TCGCTCGCAA TGTCTTTTTA GAGATAGTTG TAATTATAAA GACCTGCCAC ACTATAACCC AAGGAACAAA TTGCGACGAG GCGCACATGA TCTATCTTCT GCCATTTTTT ACTGTGCTGA TTTGGGGTGG CAACTCGATT GTCAATAAAC TCGCGGCCTC GACCATCGAA CCTAGTGCGA TGAGCTTTTA TCGCTGGCTA TTGGCTATGG CGATCCTCAC TCCTTTCTGT CTACCTAGCG CTATCCGCCA ATGGTCAACG GTGAAACGCC ACTTGAGTAA ACTCGCATTT TTGGCTTTAC TCGGCATGGT GCTTAACCAA TCCCTAGGCT ACTACGCGGG GCTCACCACC ACGGCGACCA ATATGTCACT CATCACTTCT TTTGTTCCTT TAATGAGTGT TTTCATTAGC TTGCCGTTAC TTAACAAACC CATCTCAGCC CTTAGCGTGG TGGGTGGCGT ACTGTCGCTG AGCGGGCTTG CCTACATGCT CGGAGAAGGA AATCCGCTGT TTTTCCTCCA TCAAAGCGTG ACCGAAGGGG ATGCCTTAAT GGTGATGGCA GCACTGGTGT ACGCCTTGTA CTGCGTGCTT TTGAAACGCT GGAAAATGCC GTTTAGCAAC TGGACTTTAA TTTATCTGCA AGGGGTATGC GCCGTATTCA TGCTGATCCC TTTATGGCTC ACCAGCGATA CGCTATTACC GACCGAAGGT TCACTCTCTC TGATCGCTTA TGCTGGCATT GCTGCTTCTC TATTAGCACC TTGGATGTGG GTAAAAGCCA TTGATGCGAT TGGCGCAGAC TCCACCGCCA TGTTTATGAA TCTGCTACCC GTTTTTTCTG TTTCTTTGGC CGCCACTTTA TTGGGCGAAA AAGTTCATCC CTACCATTTA ATTGGTGATC TATTAGTCAT CAGCGGTGTC GCGCTGTCAC AATTGAAAAT TCAACGTCGA AACGATGACG GCGTCGAAAA AGTGACGCAG GTATAA
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Protein sequence | MQVSSAFFQS CLPIARNVFL EIVVIIKTCH TITQGTNCDE AHMIYLLPFF TVLIWGGNSI VNKLAASTIE PSAMSFYRWL LAMAILTPFC LPSAIRQWST VKRHLSKLAF LALLGMVLNQ SLGYYAGLTT TATNMSLITS FVPLMSVFIS LPLLNKPISA LSVVGGVLSL SGLAYMLGEG NPLFFLHQSV TEGDALMVMA ALVYALYCVL LKRWKMPFSN WTLIYLQGVC AVFMLIPLWL TSDTLLPTEG SLSLIAYAGI AASLLAPWMW VKAIDAIGAD STAMFMNLLP VFSVSLAATL LGEKVHPYHL IGDLLVISGV ALSQLKIQRR NDDGVEKVTQ V
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