| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0299 |
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| Symbol | |
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| ID | 5134445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 332911 |
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| End bp | 333672 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640530622 |
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| Product | DeoR family transcriptional regulator |
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| Protein accession | YP_001215140 |
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| Protein GI | 147671590 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.179752 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAGCAG TAAAGCGCCA TCAAGAAATC ATTGAATTGG TTCAAGCCCA AGGTTTTGTG
AGTACGGAAG AGCTGGTTGA GCGATTTGAT GTTAGCCCAC AAACCATACG GCGAGATCTC
AACGAATTGG CCGAAGCCAA TAAATTGCGG CGCAACCATG GCGGCGCAAC GATTGCAACC
AGTTCGGAGA ACTCCTCTTA TCACACGCGG CAAGTTTCTT ACCAAAATGA AAAAGAGAAA
GTCGCCATGG CCTTGGTTCA GCACATTCCT GACGGCGCCA CACTGTTTAT TGATATTGGC
ACTACGCCAG AAGCCATCGC TCGCGCTTTA ATGGTTAATC ATCATCAACT GCGTGTGGTG
ACCAACAACT TAAACGTCGC CACTATGCTA ATGAGTAAGC CTGATTTCAG CATCATTTTG
GCGGGGGGAG AAGTCCGTAA TAAAGACGGC GGCGTAACAG GCGAAGCCAC ATTGGATTTT
ATTTCCCAAT TTCGTTTGGA TTTTGGCATT TTGGGGATCA GTGGCATCGA TTATGACGGC
TCTCTGCTTG ATTTCGACTA CCATGAAGTG CGCGTAAAAC GCGCGATTAT CGAAAATAGC
CGCAGTGTCT TCCTCGCGGT CGACCACAGT AAATTTGGCC GCAACGCGAT GGTCAAACTC
GGCACATTGG CCGATGTCGA TTTGATCATT ACTGACCAAA CGCCACCGAA AGAGATTGAA
GCGTTCGCCA AAGAGAATGA AGTCACGATT CAGGTGGTGT AA
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| Protein sequence | MKAVKRHQEI IELVQAQGFV STEELVERFD VSPQTIRRDL NELAEANKLR RNHGGATIAT
SSENSSYHTR QVSYQNEKEK VAMALVQHIP DGATLFIDIG TTPEAIARAL MVNHHQLRVV
TNNLNVATML MSKPDFSIIL AGGEVRNKDG GVTGEATLDF ISQFRLDFGI LGISGIDYDG
SLLDFDYHEV RVKRAIIENS RSVFLAVDHS KFGRNAMVKL GTLADVDLII TDQTPPKEIE
AFAKENEVTI QVV
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