| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0261 |
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| Symbol | |
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| ID | 5134524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 298547 |
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| End bp | 300166 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640530584 |
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| Product | ABC transporter, ATP-binding protein |
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| Protein accession | YP_001215102 |
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| Protein GI | 147671832 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4172] ABC-type uncharacterized transport system, duplicated ATPase component |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 0.854245 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACCCA ATCCACTTTT GCAAGTTCGT AATTTAAGCG TGAGCTTTAC CACCAATGAT
GGTGTTGTCG ATGCGGTGAA AAACGTCAGC TTTGATATAC GCCCCGGAGA AACCCTTGCG
ATTGTCGGTG AGTCAGGTAG TGGTAAATCG GTTTCGACCA ACGCCTTGAT GCAACTGCTG
CCTAAAAACG CGCGGATCCA TCCAGAATCG AGCATCATGT TTGAAGGTGA AGAGCTGCTC
AATAAAACGG ACACGCAGAT GCGCCGCATC CGTGGGGATC GGATTGGCAT GATCTTCCAA
GAGCCGATGA CTTCACTCAA TCCCTATATG CGTGTTGGCG TTCAAGTTGC TGAAGCTATT
CGTTGCCACC GTAATGTCAG CCAGAATCAA GCGAAACAGC GAGTCTTGGA GCTGTTTCAG
CTCGTTCATC TGCCCGACCC CAAAGGCGCT TACCAAAAAT TCCCGCATGA GTTTTCCGGC
GGTCAGTTAC AGCGCATTAT GATTGCGATG GCACTGATCA ATGAGCCGGA TATTTTGATC
GCCGATGAAC CGACCACGGC GCTCGATGTC ACAGTTCAAG CCGAAGTGCT CCGACTCATC
AAAGAGATCC AAGCCAATAT GGGCATGGCG ATTTTGTTTA TCACCCACGA TTTAGGTGTG
GTGAAATTTG TTGCCGACCG CGTGCTGGTA ATGTGTAAAG GGGATGTGGT AGAGCAAGGC
TCTACTGAAC AGCTTTTCCT GCAACCTGAG CATGATTACA CACGCATGCT GATTAACTCG
ATACCCAAAG GCAGTAAAGA CCCAGTTGCT GTCGATGCAG CACCACTGCT CAAAGCCGAA
GATATTCGAG TCAAGTTTCT GGTTAAACCG TACTTTATCA GTCGTCGTAA TCAGTACTTT
GAAGCAGTGA AAGGGATTTC TCTTGAACTC AAGCAAGGTG AAACTCTCGG TATCGTAGGC
GAATCTGGCA GCGGAAAATC CACATTAGGG CGAGCTTTGA TTGGTTTACT GCCTTCCACG
GGTCAGATTG CCTTCAAAGG GCAAGACTTT CGCGCTTTGA GCGAGAAACA GCGCTTAGCC
CTGAAGAAAG ACATTCAGAT GGTGTTTCAA GACCCTTATG GCTCGCTTTC TCCACGTATG
ACCGTTGGCG AAATCATCAC TGAAGGGCTT TTGGTTCACC AACCTCACAT CAGTAAGTTG
GAACGTATGC AACGGGCGAG ACGAGCGCTC GAAGAAGTGC GATTAGATCC GAATTCGATT
AATCGTTACC CACATGAGTT CTCCGGTGGT CAACGTCAGC GGATTGCGAT TGCTCGGGCG
CTAATTCTGG AACCTTCCTT TATTTTATTG GATGAGCCCA CTTCAGCGCT GGATCGCTCC
GTACAACTGA CGGTCATTGA ACTGCTAAAA GAGATTCAAA AACGACGCAA CATCGGCTAT
CTGTTCATCA GCCACGATCT TGCCGTGGTA AAAGCGTTAT CGGATCGCGT GTTGGTAATG
CAAAAAGGGC AAGTGATGGA ACAAGGCAGT GCGGAATCCA TCTTCCATAA TCCACAACAT
GAATACACCA AAAAACTGAT CGCTGCTTCT TTCGACATTC TGGAAGAAAA TGCAGCATGA
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| Protein sequence | MSPNPLLQVR NLSVSFTTND GVVDAVKNVS FDIRPGETLA IVGESGSGKS VSTNALMQLL
PKNARIHPES SIMFEGEELL NKTDTQMRRI RGDRIGMIFQ EPMTSLNPYM RVGVQVAEAI
RCHRNVSQNQ AKQRVLELFQ LVHLPDPKGA YQKFPHEFSG GQLQRIMIAM ALINEPDILI
ADEPTTALDV TVQAEVLRLI KEIQANMGMA ILFITHDLGV VKFVADRVLV MCKGDVVEQG
STEQLFLQPE HDYTRMLINS IPKGSKDPVA VDAAPLLKAE DIRVKFLVKP YFISRRNQYF
EAVKGISLEL KQGETLGIVG ESGSGKSTLG RALIGLLPST GQIAFKGQDF RALSEKQRLA
LKKDIQMVFQ DPYGSLSPRM TVGEIITEGL LVHQPHISKL ERMQRARRAL EEVRLDPNSI
NRYPHEFSGG QRQRIAIARA LILEPSFILL DEPTSALDRS VQLTVIELLK EIQKRRNIGY
LFISHDLAVV KALSDRVLVM QKGQVMEQGS AESIFHNPQH EYTKKLIAAS FDILEENAA
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