Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0237 |
Symbol | |
ID | 5134364 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | + |
Start bp | 270113 |
End bp | 270742 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640530560 |
Product | hypothetical protein |
Protein accession | YP_001215078 |
Protein GI | 147672360 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGATG TTTCGGTATT ACCGGTTTAT CTCACCGCGG TATTGGCGCT GTTGCTGATC CCAGGGCCAG ATATGCTGCT GATTGCGAGC TCTAGTATGA GCTACGGACG CCGAGTCGGT TTGTTTGCCA GCTTGGGCAA TGCCACATCA GGGATGATTT TAACCTTACT CGCGGCGCTC GGGGTTTCCG CACTGATTGC GATGAACCCG TTGGCGCTCA ATGTGCTGCA TTTGTTGGGG GGAGCATACC TGCTCAAAAT GGCGTGGGAT TGCCTACGCG CCGATGCAGC GCAAGCGCCC ACCTTGGATG AGGCACAAGC GGTAGCAAAA ACCTTTTACC AACGCGCTTT AGTGAGCAAT TTGCTGAACC CCAAAGCCTT GGTGTTCTTT GTGCTGTTTT TGCCGCAGTT TGTTTCAACC AATATCGCAG CCAGCTCCGC CGAACAGATG TTCGCGCTGG GTATGGTGCT GAATGTGTGC GGCTTGCTGT TTAATCTGCT GCTAGTGGCT TTGATTGGTG TGTTTGGTCG CTCGCTAGTC GATAATCAGC GTTTTCGCAC TTACCAGCAC AAAGTGATGG GCGCGGTGTT TTTGCTGCTA GCGCTCTGGA TGCTCAGCGA TTTTGTGTGA
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Protein sequence | MIDVSVLPVY LTAVLALLLI PGPDMLLIAS SSMSYGRRVG LFASLGNATS GMILTLLAAL GVSALIAMNP LALNVLHLLG GAYLLKMAWD CLRADAAQAP TLDEAQAVAK TFYQRALVSN LLNPKALVFF VLFLPQFVST NIAASSAEQM FALGMVLNVC GLLFNLLLVA LIGVFGRSLV DNQRFRTYQH KVMGAVFLLL ALWMLSDFV
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