| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0230 |
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| Symbol | |
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| ID | 5134908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 264869 |
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| End bp | 265864 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640530553 |
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| Product | putative outer membrane protein |
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| Protein accession | YP_001215071 |
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| Protein GI | 147672511 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAG CAGCAATCGC AGTAGCAGTT CTTTCCGCAG TGGTATCTGG CTCAACCTTA
GCCGCAACCG TTTATGATGC AGAAGGCACT TCACTCAAAG TGGGGGGTCG TCTGGAGTTC
CGTGGTGATT TCAATGGCAA CGATAAGGGC GAAGAAATTG AAGGCACAAT GCTCAACAAG
AGCCGTGTGC GTTTGAATGT GGCAGGTGAA ACCGACATTG GTGCTGGCAT GAAAGGCTTT
GGCTTCTGGG AAGCAGAGCA AGGCGTAAAA TCGTCCGCAG GAACGTCAAC AGAGCAAGAA
ACGACGTTCA AACAACGTTA TATGTACGTG GGTATGAAAG GCGATTTTGG TAGCCTCTCC
TTTGGCCGCC AAAACACCGC TGGCGTGCAA ATTTCTGACA TGTCTGATAT CGGTACCTTT
ACTGGCGATC AAAAAGCCTT CGTCAGTGCA GGTAACGAGC AGATCAACAA CACTATCGCG
TATGGTTATG ACTTCGAAAG CTTCAAGCTA AAAGCAAGCT ACATTGCTGA TGATCAGAAA
AATGCTGATG GCTATGGCCT GTCAGGCATC TACTCAGCGC CATTTGGTTT GGATATCGGT
TTAGGTTATG CCGCGAATGA TCTGGGTACA GATAAAGGTT CAGCGGATCA AATCATTGCG
GGTTTGGGTT ACACCATGGG TGACCTCTAC TTCGGGGCCA CTTACACCAC GGGTGATAAA
GATGACAAAG CAGACACGGA ATTTACCGGT ATCGAAGTCT CTGCACAGTA CAAAATCACC
AAAGAATTTC GCCTGATCGC GGCTTACCAA AACCAAGAAG AAGAGACCAA GAATGTCACT
AAAGACAAAG CGGATTTCTT TGAACTCACT GGTCGCTACG ATTTCACGAA AAACTTCCGC
TCTTACCTCG CTTACAAAGC GAACGGACTG GATGACAAAG ACGCAGGCTA CAAAGTCGAA
GACACCATCC GCCTAGGTCT ACGTTACGAT TTTTAA
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| Protein sequence | MKKAAIAVAV LSAVVSGSTL AATVYDAEGT SLKVGGRLEF RGDFNGNDKG EEIEGTMLNK
SRVRLNVAGE TDIGAGMKGF GFWEAEQGVK SSAGTSTEQE TTFKQRYMYV GMKGDFGSLS
FGRQNTAGVQ ISDMSDIGTF TGDQKAFVSA GNEQINNTIA YGYDFESFKL KASYIADDQK
NADGYGLSGI YSAPFGLDIG LGYAANDLGT DKGSADQIIA GLGYTMGDLY FGATYTTGDK
DDKADTEFTG IEVSAQYKIT KEFRLIAAYQ NQEEETKNVT KDKADFFELT GRYDFTKNFR
SYLAYKANGL DDKDAGYKVE DTIRLGLRYD F
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