| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0210 |
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| Symbol | |
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| ID | 5134606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 243217 |
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| End bp | 244848 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640530533 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | YP_001215051 |
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| Protein GI | 147671512 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000000000824359 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTTCT TCAAAAATTT AGCGAGAGGC AAAAAAATCG CAGTCGCGTT TGGCGTGATT
GCCTTAATCA ACTTAGCTTT TGGTGGCTAC CTTTATAACT CCCTTCATAC CATTAAAAGC
GACGTACTCA ATCTGACTGA CGATACCTTA CCTTCGATGA TGTTGGTGAA CGGTATCAAG
TACAATATGT CCTCCGTGCG TAGAGCGCAA ATCAGCTTAC TTTCCTCAAC CGATGAAGCA
GAAATCGCCG AAGACATCCG CTGGATGAAC GATCACTATC AACAAATCGC CCAAGATCTG
AGCCGCTATG AGCGCAGCAT TTGGACCGAT CACGAACGTA GCATCTTCAT GCCAGTGAAA
AACTTATGGA ACGAGTACTT ACGCCAGCTC GGTTCATTTA ACAACGACAT CCTACAAAAA
GAGATGATCA AAGCGCAGCA AGATCTGCAA CGCTCTCTAC CTACGTTTGA AAAGTTGGAA
ACAGCGATTG ACGAACTGCT GAAACTCAAC CTCTCTTATG TGGATAATAA CCGCAGTGAG
CTGACCGAGC TTATTGATAA CATTAGCGAA TTTTCTGTCG CAAGCATTGT TGCCCTCCTC
GCCTTTATGA GTGCGGTGAC GTGGCTGCTC ACCAATCTTA TCTGCAGTCC ACTGATGCAA
GTCGTCACTC AAGCGAATGC GATTGCCGAA GGTAACTTAG CGCACCGCTT AGATCGCAAA
ACCATCGGTC ACGACGAATT AGGTGAACTG GCAGATGCCT GCAGCAAAAT GCAAAATAAC
CTGCGCCTGA TGGTCGAAGA GATCATTACT AGCGCGACTC AACTGGCGCA TGCGGTGGAT
GAAGTGAGCG CGGTGTCCGA GCAAACATCA CAAGGCATGC AGATCCAGCA AGAAGAAGTG
ATGCAAATTG CAACAGCCAT GGCCGAGATG AAATCGACCG TAGCAGAAGT CGCTCGTAAT
ACTGAAGTCG CTTCAGATGC ATCACGCGAC AGCAGCCAAC ACGCCAACGT GGGTTCACAA
CAAATGCGCG CCGTCAATGA CTCGATTCAA CATGTGAATC AAGAGATCGG CCGCACAGAA
CAGCGTGTGC TGGAGCTAGA AAGCCAAGCG CAACAAATCA ACATGGTGGT TGATGTGATC
AGTAACATCG CGGAACAGAC GAACCTACTC GCACTGAACG CAGCGATTGA AGCCGCGCGC
GCTGGCGAAC AAGGCCGTGG CTTTGCGGTA GTCGCCGACG AAGTACGTTC GCTGGCAGGT
AAAACCCAGC AGTCCACTGG CGATATCGTT GAGATCATTC AAAACTTGCA AGCCTGCGCA
CAAAAAGCAC GCGAAACCAC CAACAACAGT CGTGAGTTGA TCAACCACTG TGTAGAGCAA
AGCCAAGAAA CACAGCAAGC GATTGAGCAA ATTCGTCACC AAAGTAGCCA AATTGCCGAT
ATGACAATTC AAATTGCCAG CGCCTGTGGT GAGCAAGATT CGGTGAGTGA AGAACTCAGC
CGTAACATTG AGCGAATCAA CGAGTCAGCC AAGCAAGTCG CACAGGGCTC CTCTAGCGCT
GCTCAATCTT GCGCAGAACT CAGCCAGCTA GCGAGCCAGT TGCAAGATAC GGTACAGCGC
TTTCGTTTGT AA
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| Protein sequence | MAFFKNLARG KKIAVAFGVI ALINLAFGGY LYNSLHTIKS DVLNLTDDTL PSMMLVNGIK
YNMSSVRRAQ ISLLSSTDEA EIAEDIRWMN DHYQQIAQDL SRYERSIWTD HERSIFMPVK
NLWNEYLRQL GSFNNDILQK EMIKAQQDLQ RSLPTFEKLE TAIDELLKLN LSYVDNNRSE
LTELIDNISE FSVASIVALL AFMSAVTWLL TNLICSPLMQ VVTQANAIAE GNLAHRLDRK
TIGHDELGEL ADACSKMQNN LRLMVEEIIT SATQLAHAVD EVSAVSEQTS QGMQIQQEEV
MQIATAMAEM KSTVAEVARN TEVASDASRD SSQHANVGSQ QMRAVNDSIQ HVNQEIGRTE
QRVLELESQA QQINMVVDVI SNIAEQTNLL ALNAAIEAAR AGEQGRGFAV VADEVRSLAG
KTQQSTGDIV EIIQNLQACA QKARETTNNS RELINHCVEQ SQETQQAIEQ IRHQSSQIAD
MTIQIASACG EQDSVSEELS RNIERINESA KQVAQGSSSA AQSCAELSQL ASQLQDTVQR
FRL
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