Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0158 |
Symbol | |
ID | 5134801 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | + |
Start bp | 183820 |
End bp | 185490 |
Gene Length | 1671 bp |
Protein Length | 556 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640530481 |
Product | hypothetical protein |
Protein accession | YP_001214999 |
Protein GI | 147672191 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1315] Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGAAAG AGATACTCGA ACTCACGCCA GATAGACAGA AAGTGATTGC AAAATTAGGT GCACAAGGTG CCGCTAAGGA GCTCAATCGC AGCGAATTGC CTATGGTGTT GGCACAAATT GGAGCGGGTA AACTGTTCAT ATTGGATGAG GAAGTCACTC GTTTTATCAA TTGTGTGAAA GAAAGTAAGC GCGCTGCGTT TGAAGGTATC GTGATTGCTG AAGTGCGTAA CGCGACGGTT TCTGTTGTGC TTGGTGAGAA AGAAATGCTA GCCAGCATGG TCGTCACTGG AGCTTATGGC GGACGCGGTC TACGCGGTAA TGAACTGGTT CATGCTCTAG CACAAGCCAG CGTGCTGAAA GGAATTAACA AACTGGCATT GAAAAAAGTA CTGCTGGTGA GTGGTCAATT AAAACCCGGT GAGGTGTTTA CTCAGCCTGT CGCTCGTGGC AAGGAGCCCA TTCAAGGGCG TGATACTCAA TTTGTACCAT TAGTGGAAGA CGTCTCGAAG CGCGTGCTGC GCCCTCAGCA GAAAGCGGGT GAAAATAAAC TCGATATGCG CAACTTAGGA GAAACCATCA CGGTTGGTGA AAATGATCCT GTGATGCGCC GTTTGCCTGC GACCAAAGGC GAGATGGGTT ACACCGTTCA GGGCAAACCT ATCCCACCTA AGCCTGGTAA AGAATCCGCT TTGGTGGCGG GTAAAGGTAC CCATATCTCC CCGAATGACC CCAATTTGTT GCTTGCCAGT CAAGCTGGCA TGCCCCTTAT TAAAAAGAAC ACCATAGAAG TGGACAGTGC GCTTTGCCTA AATCATGTCA GTGTGGCCAC TGGGCATATC CGCTTTAAAG GTAATGTCGT GATTGCTGGG GATATTGAAC CGGGCATGAT TGTTCGCGCG ACGGGGTCGA TTACGGTTGG CGGTTTTATT GAATCTGCTA ACGTTCAAGC ACAAGGCGAT ATAGACGTCG GTAAAGGCAT CATCGGACAC ATGGTGACGG ATGATGAAGA GCGCAGCTGC GTGGTGAAAT CTGGCGGCAG TATTCGCGCT AACTACGCGC AGTATGTTGA GTTACAAGCG GCGGATTCTA TCCATCTTGG CGTACACAGC ATTGGCAATA TTATCCGTTG CGGAAATGAT TTGACGGTGC TCGACAGCAA AATGACCCAA GGCACACTCA GTGCAGGAAA CGCCAAAGTG GGTGGGAAAG TGCTCTGCTT TAATCTCGGT GTGGAGGGCG ACACGGCGAC TCATGTTGAG GCTTTTGCGC GTTACCAAAG TTATAAAGAG AGAATCAACA AACACAAAGA ACTCTATAAG CAAGCTCAAG ACACGACAAT GGCGTTGATT CGGCGTGAAA TCGAGTTTAA AAAACGTCCG AAAGCAGAAC GTAGCGATGA AGAAGCTCAA GAAATAGAAA CCGCGAAAGC AGACGCGTCG ACCCAGATGG AAAAAATCAA ACTTGCTTTG GATATGCTCA ATGAAGAGTT TGAGCAGCAG CTATTGGAAA ATACGGTGGA AGCGAAAAAT AAAGTATTTA CCCATGTCAC GATTCAGTTT GGTGATGAGA AAGTGCTGAC CAAGCGAGAA CACGGCGCCT CGATTTTCAA ATTTAACCAA TACGAAATTA AGCTCTCTTC ACTATTGGAA GCGGAAGATA TTGGTATTTA A
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Protein sequence | MWKEILELTP DRQKVIAKLG AQGAAKELNR SELPMVLAQI GAGKLFILDE EVTRFINCVK ESKRAAFEGI VIAEVRNATV SVVLGEKEML ASMVVTGAYG GRGLRGNELV HALAQASVLK GINKLALKKV LLVSGQLKPG EVFTQPVARG KEPIQGRDTQ FVPLVEDVSK RVLRPQQKAG ENKLDMRNLG ETITVGENDP VMRRLPATKG EMGYTVQGKP IPPKPGKESA LVAGKGTHIS PNDPNLLLAS QAGMPLIKKN TIEVDSALCL NHVSVATGHI RFKGNVVIAG DIEPGMIVRA TGSITVGGFI ESANVQAQGD IDVGKGIIGH MVTDDEERSC VVKSGGSIRA NYAQYVELQA ADSIHLGVHS IGNIIRCGND LTVLDSKMTQ GTLSAGNAKV GGKVLCFNLG VEGDTATHVE AFARYQSYKE RINKHKELYK QAQDTTMALI RREIEFKKRP KAERSDEEAQ EIETAKADAS TQMEKIKLAL DMLNEEFEQQ LLENTVEAKN KVFTHVTIQF GDEKVLTKRE HGASIFKFNQ YEIKLSSLLE AEDIGI
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