| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0115 |
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| Symbol | vgrG-2 |
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| ID | 5134048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 130209 |
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| End bp | 132293 |
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| Gene Length | 2085 bp |
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| Protein Length | 694 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640530438 |
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| Product | vgrG protein |
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| Protein accession | YP_001214956 |
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| Protein GI | 147671987 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGACAT TAGCGTACAG CATTGAGGTG GAAGGGCTGG AAGATGAGAC TCTGGTGGTC
AGAGGCTTTC ACGGGCAGGA GCCACTCTCC AACAGTGTTT TTTTAGGGCA AGCCTGTTAC
GGGTTTCGCT ACGAAGTGCA ACTGGCGAGT CGGGTATCCA ATCTGACTGC TGAGCAGATG
GTGGATAAGC GTGCTGAGCT CAAGATTTAC CGCAATTCAC AGTTGGTGCA GCGCGTGCAC
GGCATTGTAC GTGCTTTCAG CCAAGGCGAT ATCGGCCATC ATCACACCTT CTACGAACTC
ACTTTAGTGC CTGCCTTAGA GCGCTTATCC CTGCGCCACA ATAGCCGCAT TTTCCAAAAG
CAGACTGTTC CAGAAATTCT CTCTATCTTG CTGCAAGAGA TGGGCATCCA CGATTACGCT
TTTGCGCTCA AACGTGATTG CGTGCAGCGT GAGTTTTGTG TGCAGTACCG TGAAAGTGAT
ATCGACTTTC TGCACCGCCT CGCCGCTGAA GAAGGCTTGG TGTACAGCTT TGTCCATGAA
GCGGGCAAAC ATACCCTCTA TTTCAGTGAT GCTAGTGACA GCCTAAGTAA ACTGCCGGAG
CCCATCCCGT ACAACGCCTT AGCGGGCGGC ACGATGGATA CACCGTACAT CCACGGCTTA
ACCTATCGCA CCCAAGCGGA AGTGAGCGAA GTTCAGCTCA AAGATTACAG CTTCAAAAAG
CCGACGTACT CGTTTTTACA AACCGTGCAG GGTACTGAGC TGGATTATCA GCAAACGCGC
TACCAACATT TTGATGCGCC GGGGCGCTAC AAAGACGATG TGAACGGCGC CGCCTTTAGC
CAAATCCGTT TAGACTACCT GCGCCGCCAT GCCCACACCG CAACAGGGCA GAGCAACGAG
CCGCTGCTGC GTGCCGGCTA TAAGTTTGAC CTGCAAGAGC ATCTTGACCC TGCGATGAAC
CGCGATTGGG TGGTGGTCTC TATTAACCAT CAAGGTGAGC AGCCGCAAGC GTTACAAGAA
GAGGGCGGCA GTGGTGCAAC GACCTACAAC AACCAGTTCA GCTTAATTCC AGGGCATCTC
CACTGGCGCG CCGAGCCACA ACCCAAACCG CAAGTCGATG GTCCAATGAT AGCCACGGTC
GTCGGTCCTG AAGGCGAAGA AATCTTCTGT GATGAACACG GGCGGGTGAA AATCCATTTT
CCGTGGGACC GCTACTCGAA CGGTAACGAG CAAAGCTCCT GTTGGGTACG GGTGTCGCAA
GGTTGGGCGG GCAGTCAGTA TGGCTTTATC GCTATTCCGC GCATCGGTCA TGAAGTGATT
GTTTCTTTCT TAAATGGCGA CCCAGACCAA CCGATTATCA CTGGCCGCAC CTATCATGCG
ACCAATACGC CGCCATACAC TTTGCCAGAG CACAAAACCA AAACCGTGCT GCGCACCGAG
ACGCACCAAG GGGAAGGGTT TAACGAGCTC AGTTTTGAAG ACCAAGCGGG CAAAGAGCAA
ATCTACCTGC ATGCGCAGAA AGACTTCGAT GGTTTGATTG AAAACGACCA CACCACGGTC
ATTCGCCACG ACCAACACCT GACCGTTGAA AACGACCAGT TCACTCAGAT TAAGCACAAC
CAACACCTGA CGGTCGAGGG GGAGAGTCGT ACGCTCGTCA AACTCGACTG CAGCAGCGAA
ATCGGCGGTT CATTGCAGCA AAAAATCGGC AGCAAAGCGA TTTACGATGC AGGCACAGAG
GTTCACCTTA AAGCGGGTAA CAAACTGGTC TTGGAAGCAG GCAACGAGCT TACCATCAAA
GCCGGCGGCA GTTTTATTAA AGTCGATGCT GGCGGTGTGC ACGTCGTCGG CTCTGCTATT
AACCTCAACT CCGGCGGCAG CGCAGGCAGC GGCTCAGGCT ATGGCGGTAA AATGGCCGAG
TTGCCACAAG GGGTGGATAA AGCCAAAACG CCGCAAGAGA TTGAGCTAGC CGCGGTAACT
CCCACTCAGC AGTCTATGTC GCCTTTACTT AAGGCGCGAC AAATTGAAGC ACTCAAAGGT
CCTGCACCTG TGTGTGAAGT GTGTGAAGAG GCCAAGGGAA ATTAA
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| Protein sequence | MATLAYSIEV EGLEDETLVV RGFHGQEPLS NSVFLGQACY GFRYEVQLAS RVSNLTAEQM
VDKRAELKIY RNSQLVQRVH GIVRAFSQGD IGHHHTFYEL TLVPALERLS LRHNSRIFQK
QTVPEILSIL LQEMGIHDYA FALKRDCVQR EFCVQYRESD IDFLHRLAAE EGLVYSFVHE
AGKHTLYFSD ASDSLSKLPE PIPYNALAGG TMDTPYIHGL TYRTQAEVSE VQLKDYSFKK
PTYSFLQTVQ GTELDYQQTR YQHFDAPGRY KDDVNGAAFS QIRLDYLRRH AHTATGQSNE
PLLRAGYKFD LQEHLDPAMN RDWVVVSINH QGEQPQALQE EGGSGATTYN NQFSLIPGHL
HWRAEPQPKP QVDGPMIATV VGPEGEEIFC DEHGRVKIHF PWDRYSNGNE QSSCWVRVSQ
GWAGSQYGFI AIPRIGHEVI VSFLNGDPDQ PIITGRTYHA TNTPPYTLPE HKTKTVLRTE
THQGEGFNEL SFEDQAGKEQ IYLHAQKDFD GLIENDHTTV IRHDQHLTVE NDQFTQIKHN
QHLTVEGESR TLVKLDCSSE IGGSLQQKIG SKAIYDAGTE VHLKAGNKLV LEAGNELTIK
AGGSFIKVDA GGVHVVGSAI NLNSGGSAGS GSGYGGKMAE LPQGVDKAKT PQEIELAAVT
PTQQSMSPLL KARQIEALKG PAPVCEVCEE AKGN
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