| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0100 |
|---|
| Symbol | |
|---|
| ID | 5134441 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009456 |
|---|
| Strand | + |
|---|
| Start bp | 109626 |
|---|
| End bp | 110498 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640530423 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001214941 |
|---|
| Protein GI | 147671877 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1639] Predicted signal transduction protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.0254877 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCCTATAG TTTGGATTAG TCACCAGATA AGGAGAATGA ACATGGTGAA AAACACAATG
CTCAACCGTT TAAATGAGCT ACCAAGACTG TCTAAAGTTC TGCAAGAATT GCTGGATATG
GCCAATCAGC CTGATGTGGA TTTTCATCAG CTCAGCAAAA AAATCACGCT GGATCAAATC
CTGACGGCGC GTTTGCTCCG CATGGCTAAT TCTGCTTATT TTGGTGGTAA CGGACATATC
GCTACCGTAA ACGATGCCAT CATCCGAGTC GGCATTGAGT CGGTTCGTAC TCTTGTTGTT
GCTTCCGTCC TCTCCAGTAC TTTTCCAAAA ATTGAGACTC TCGATCTGAA TGATTACTGG
ACCAATACCT TTGAAACAGC GTTAATTGCC AGCAAGATTG CCGAACAAGT CGGTTTGGAT
AAGTCAGAAA CGTTTACCAC AGGCGTGCTG CATAACATTG GCGAACTCAT GATTCATACT
TTGATGCCCA CCGAGGCCTC ACTGATCCAA CAGAAAATCG CCCAAGGCAT GGATCCGCTC
AGCGCTCAAG AAGAGGTCTT AGGTATTTCA GCGCCTCGCA TTGGTGCGAT GTTGGCAAAA
GAGTGGAAAT TCCCTTCGGA AATGGTTGAT GCCATTAAAC ATTTTGATGA ACCCCGTGAA
GCCGAAATCT CCCCCAAACT GGCGGTGGCG ATTCACTTTG CCCGCGATAT TAACTTCAGT
TGGGACAAGC TCACGGAAAG CAAAGAGAAA TCGATCTACC TTGCTGACCA TCCTGACTCG
CGTTTACTCA GCATTTCTGC TGCCTTCCAA TCCACCATTG ATCGGGTACG CGGCAATGGA
AAGGAGTTAG CCACACAGAT GATGGCGGCC TAA
|
|---|
| Protein sequence | MPIVWISHQI RRMNMVKNTM LNRLNELPRL SKVLQELLDM ANQPDVDFHQ LSKKITLDQI
LTARLLRMAN SAYFGGNGHI ATVNDAIIRV GIESVRTLVV ASVLSSTFPK IETLDLNDYW
TNTFETALIA SKIAEQVGLD KSETFTTGVL HNIGELMIHT LMPTEASLIQ QKIAQGMDPL
SAQEEVLGIS APRIGAMLAK EWKFPSEMVD AIKHFDEPRE AEISPKLAVA IHFARDINFS
WDKLTESKEK SIYLADHPDS RLLSISAAFQ STIDRVRGNG KELATQMMAA
|
|---|
| |