| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0092 |
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| Symbol | |
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| ID | 5134443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 102731 |
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| End bp | 103957 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640530415 |
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| Product | sodium/glutamate symporter |
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| Protein accession | YP_001214933 |
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| Protein GI | 147672016 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0786] Na+/glutamate symporter |
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| TIGRFAM ID | [TIGR00210] sodium--glutamate symport carrier (gltS) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0000111115 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCAGA TCATTTCAAT TGGAGCATTA GAGTCTTTTC TTATTGCTAT CAGTGTCCTG
TTTTTAGGTC ACTTTATTAA TGCCAAACTG CCCATTTTAA CCAAGTTCAA CATTCCAGAG
CCGATTGTGG GTGGGCTTAT CGTCGCCTGT GTGATTACTG CGTTGCACTT TCACGGTATT
GATATGGAAT TTTCACTGCC GCTGCAAAAT GTCTTCATGT TGATGTTCTT TAGTACGGTG
GGCCTTGCGG CCAACTACAC CCAACTGATT AAGGGTGGCG CGAAGGTGTT TCTGTTTTTA
GCCGTGGCTT CGGTGTTCAT CATTATTCAA AACGGTGTGG GCGTTTCGCT TGCAGCAGGT
TTAGGCTTAG ATCCTTTACT GGGCTTGATC GCAGGCTCCA TCACACTCTC TGGAGGCCAT
GGCACGGGAG CGGCTTGGGC AAACACGTTT GCCGAAAATT ATGGCCTTGC CAATACGTTA
GAAATCGCGA TGGCATCTGC CACTTTTGGT TTGATCATCG GTGGGATTAT CGGTAGTCCA
GTCGCGCAGA AACTGGTTGA TAAACATGGT ATTGAATCTG AGTATGGGCG CGGCACACAA
ACCCACTCTC GTTTTCCTGA ACTGGTCACT TATAACGAAT ATGAAGAAGA TAAAGTCACC
GCCAAAAAGG TGATTGAAAT CTTGTTTATC TTGCTCATAT GCGTTACCGG AGCAAAATAC
CTAGAAGCTT GGGTTAAAAC CTTTGAAATT CGTTGGTTGA TGATCCCCGA TTTCGTTTAC
GCCCTGTTTA TTGGTGTCTT TATCACCAAT CTGCTCGAAG TCACTAAGCT GCGTAAGGTG
GATGCGGAGA CGGTGGATAT TTTAGGCACG GTTTCTTTGT CGCTGTTTCT CGCTATGGCT
CTGATGAGCC TGAAATTGTG GAATATCTTC GATTTAGCAC TACCGTTTTT GGTGATCCTC
GCTATTCAAT CGGTCGTGCT GGGCGTCTTT TGCTACTTCG TCACCTTCAA AGTGATGGGG
GCTAATTATG ATGCAGCGGT GATTTCGGCT GGGCATTGTG GTTTTGGTTT GGGGGCAACG
CCTACCGCGG TGATGAATAT GGGATCGGTC GTAAAACGCT TTGGCCCTTC ACCACAAGCG
TTTATGGTGG TGCCGATCGT CGGTGCTTTC TTTATCGACA TCGTTAACCT AATCATCTTG
CAGGGGTACA TTTCATTTTT GGGATAA
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| Protein sequence | MNQIISIGAL ESFLIAISVL FLGHFINAKL PILTKFNIPE PIVGGLIVAC VITALHFHGI
DMEFSLPLQN VFMLMFFSTV GLAANYTQLI KGGAKVFLFL AVASVFIIIQ NGVGVSLAAG
LGLDPLLGLI AGSITLSGGH GTGAAWANTF AENYGLANTL EIAMASATFG LIIGGIIGSP
VAQKLVDKHG IESEYGRGTQ THSRFPELVT YNEYEEDKVT AKKVIEILFI LLICVTGAKY
LEAWVKTFEI RWLMIPDFVY ALFIGVFITN LLEVTKLRKV DAETVDILGT VSLSLFLAMA
LMSLKLWNIF DLALPFLVIL AIQSVVLGVF CYFVTFKVMG ANYDAAVISA GHCGFGLGAT
PTAVMNMGSV VKRFGPSPQA FMVVPIVGAF FIDIVNLIIL QGYISFLG
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