| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0083 |
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| Symbol | deoD-2 |
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| ID | 5134028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 90674 |
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| End bp | 91411 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640530406 |
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| Product | purine nucleoside phosphorylase |
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| Protein accession | YP_001214924 |
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| Protein GI | 147672088 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0813] Purine-nucleoside phosphorylase |
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| TIGRFAM ID | [TIGR00107] purine-nucleoside phosphorylase, family 1 (deoD) |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.0506882 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGGCGAAAT TGAATTGGAG AGTAACCATG GCAACCCCAC ACATTAACGC TCAACCTGGT
GATTTTGCTG AAACCGTATT GATGCCGGGC GATCCACTAC GTGCGAAATA CATTGCAGAA
ACCTTCTTGG AAGACGTCAA GCAAGTGTGC GATGTACGTA GTATGTTTGG CTTTACAGGC
ACATACAAAG GCAAAAAAGT CTCTGTGATG GGTCATGGCA TGGGCATCCC TTCTTGCAGC
ATTTATGTAC ATGAATTGAT TGCAGAATAT GGTGTAAAAA ACATCATTCG TATCGGCAGC
TGTGGTGCAG TACGTGATGA CGTCAAACTG ATGGACGTGG TGATCGGTAT GGGTGCATCA
ACTGACTCAA AAGTGAACCG CATCCGCTTC AGCGGCCATG ATTTTGCGGC CATCGCCGAC
TACGACTTGC TGGAAACGGC GATTAACCAA GCTCGTGCTC AGCAAGTACC AGTAAAAGTG
GGTAACGTAT TTTCTGCCGA TCTGTTCTAC ACCCCTGAGC CTGAGATTTT CGAAAAGATG
AAAAAACTCG GCATTTTAGG TGTGGATATG GAAGCGGCGG GTATCTACGG TGTAGCGGCT
GATCTCGGCG CACGCGCTCT GACGATTCTG ACTGTATCGG ATCACATTCT ACGTGGCGAA
AAACTCAGCT CAGAAGATCG TCAAAAGTCA TTTAATGACA TGATGAAAGT TGCGCTTGAA
ACTGCCATCA ACATCTAA
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| Protein sequence | MAKLNWRVTM ATPHINAQPG DFAETVLMPG DPLRAKYIAE TFLEDVKQVC DVRSMFGFTG
TYKGKKVSVM GHGMGIPSCS IYVHELIAEY GVKNIIRIGS CGAVRDDVKL MDVVIGMGAS
TDSKVNRIRF SGHDFAAIAD YDLLETAINQ ARAQQVPVKV GNVFSADLFY TPEPEIFEKM
KKLGILGVDM EAAGIYGVAA DLGARALTIL TVSDHILRGE KLSSEDRQKS FNDMMKVALE
TAINI
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