Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0071 |
Symbol | |
ID | 5134211 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | - |
Start bp | 75405 |
End bp | 75965 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640530394 |
Product | hypothetical protein |
Protein accession | YP_001214912 |
Protein GI | 147672139 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAACCC TCTCGACTAT GGCCACTCTG TTGGCGTTGA GCTTACCGGT AATGGCGCAA GAGTGTGCAA GTGATATTAT GCGCACCGCA CCCAACTTAC GTTATGTGTA CAGCACCCAA GGAACAGTAA AAGACCTGCA CACAGGGTTA ACGTGGATGC GCTGCACCTT TGGCAAAGAG TGGAATGCTG AGCAAGGACG TTGTACAGGA CAGGCGCAAC CTCTGCGCTG GCAAGCGGCA CTGCAAGAAG TGCAAGCGAT CAATCACCCG GGTAGCCGTC ACCGTTTACA CCAGTTTGCG GGTGTTAAAC AGTGGCGCAT GCCAAACATC AAAGAGCTAA GCAGTTTGAC CGAACAAGCC TGCTTTGCGC CAGCGGCGAA TGAGACGGCG TTTGCCTCTG GCTTAGTGAC CGAGGTGGGC AACTATGCCG CTTATTTATG GAGTAATACC ACGCGTATTG AGCGTGAAGA AGCTTGGACG TGGGATGCCA TTAACGGCGA GATTTATGCG TACTCGATTC ACGCTCATGA AATGGGGTTG CTCCTTGTGG CGGATGAGTA A
|
Protein sequence | MKTLSTMATL LALSLPVMAQ ECASDIMRTA PNLRYVYSTQ GTVKDLHTGL TWMRCTFGKE WNAEQGRCTG QAQPLRWQAA LQEVQAINHP GSRHRLHQFA GVKQWRMPNI KELSSLTEQA CFAPAANETA FASGLVTEVG NYAAYLWSNT TRIEREEAWT WDAINGEIYA YSIHAHEMGL LLVADE
|
| |